RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 TRMT1Q9NXH9 659 aaKnown RBP6.94□□□□□ -1.3
CLIP4-202ENST00000401605 PAPPA2Q9BXP8 1791 aa6.94□□□□□ -1.3
CLIP4-202ENST00000401605 TRPM7Q96QT4 1865 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 IREB2P48200 963 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 SLC4A3P48751 1232 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 NASPP49321 788 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 WASHC5Q12768 1159 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 SPRYD7Q5W111 196 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CCDC102BQ68D86 513 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CCDC174Q6PII3 467 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 SYT10Q6XYQ8 523 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CTU1Q7Z7A3 348 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 SRLQ86TD4 932 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 WDR75Q8IWA0 830 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CKAP2LQ8IYA6 745 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CHCHD4Q8N4Q1 142 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 SLC10A4Q96EP9 437 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 RSRC1Q96IZ7 334 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 UIMC1Q96RL1 719 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 MAK16Q9BXY0 300 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 API5Q9BZZ5 524 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 C12orf49Q9H741 205 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 DIAPH3Q9NSV4 1193 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 BMP2KQ9NSY1 1161 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 GINM1Q9NU53 330 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 MKS1Q9NXB0 559 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 TCEAL9Q9UHQ7 104 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 MANSC4A6NHS7 340 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 TMEM110-MUSTN1A8MSY1 372 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 EYA2O00167 538 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 SGSM2O43147 1006 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 NDUFB5O43674 189 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 HIP1RO75146 1068 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 ALDH1A1P00352 501 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 UBTFL1P0CB47 393 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 ZBTB48P10074 688 aaPredicted RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 RPL17P18621 184 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CLK1P49759 484 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 DZIP1LQ8IYY4 767 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 PGBD3Q8N328 593 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 MIGA1Q8NAN2 632 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 KLHDC4Q8TBB5 520 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 VMP1Q96GC9 406 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 IWS1Q96ST2 819 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 MPHOSPH6Q99547 160 aaKnown RBP6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CFHR5Q9BXR6 569 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 CTNNA3Q9UI47 895 aa6.93□□□□□ -1.3
CLIP4-202ENST00000401605 FAM221BA6H8Z2 402 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 TBC1D8O95759 1140 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 SLC5A1P13866 664 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 CYP11B2P19099 503 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 FGFR2P21802 821 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 SMARCA1P28370 1054 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MCM4P33991 863 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 CRKP46108 304 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 RFX5P48382 616 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 RGS19P49795 217 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 BCAMP50895 628 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 ATP1A2P50993 1020 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MNAT1P51948 309 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 NSUN2Q08J23 767 aaKnown RBP eCLIP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 CRYMQ14894 314 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 TEX35Q5T0J7 233 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 NBPF12Q5TAG4 269 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 GABPB2Q8TAK5 448 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 LPIN2Q92539 896 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 NACC2Q96BF6 587 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 CDK5RAP3Q96JB5 506 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 C8orf48Q96LL4 319 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 SCLT1Q96NL6 688 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 ADAM33Q9BZ11 813 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MUC3BQ9H195 1237 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 RBSNQ9H1K0 784 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 TDRD3Q9H7E2 651 aaKnown RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 NEUROD4Q9HD90 331 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 CHST12Q9NRB3 414 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 LMCD1Q9NZU5 365 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 TBC1D7Q9P0N9 293 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 ZNF70Q9UC06 446 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 NOB1Q9ULX3 412 aaKnown RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 PRKAB1Q9Y478 270 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MAST3O60307 1309 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 AOX1Q06278 1338 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 GPR25O00155 361 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 CDC45O75419 566 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MYL1P05976 194 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 GCFC2P16383 781 aaKnown RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MZF1P28698 734 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 ZNF131P52739 623 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MLLT1Q03111 559 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 PAK2Q13177 524 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 PKN2Q16513 984 aaKnown RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 PACS2Q86VP3 889 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 TRIM50Q86XT4 487 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 ZNF296Q8WUU4 475 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 MRIQ9BWK5 157 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 DHX36Q9H2U1 1008 aaKnown RBP6.92□□□□□ -1.3
CLIP4-202ENST00000401605 ZNF446Q9NWS9 450 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 QPCTLQ9NXS2 382 aa6.92□□□□□ -1.3
CLIP4-202ENST00000401605 C6orf203Q9P0P8 240 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms