RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 ABCF3Q9NUQ8 709 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 THOC2Q8NI27 1593 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 MCF2LO15068 1137 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 NPR1P16066 1061 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 EEF1B2P24534 225 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 ART3Q13508 389 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 MESDQ14696 234 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 GPR162Q16538 588 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 EFCAB13Q8IY85 973 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 FRMD3A2A2Y4 597 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 SOX5P35711 763 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 TMED2Q15363 201 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 ATG16L1Q676U5 607 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 RSRC2Q7L4I2 434 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 NOSTRINQ8IVI9 506 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 ZMAT2Q96NC0 199 aaKnown RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 TLK1Q9UKI8 766 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 SUFUQ9UMX1 484 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 PACSIN2Q9UNF0 486 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 MAGED2Q9UNF1 606 aaPredicted RBP13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 SLC8A2Q9UPR5 921 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 ARHGEF18Q6ZSZ5 1173 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 G2E3Q7L622 706 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 DEPDC1BQ8WUY9 529 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 NT5C1BQ96P26 610 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 TUBB6Q9BUF5 446 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 SLC39A2Q9NP94 309 aa13.37□□□□□ -0.27
CACNA1C-219ENST00000399649 LIG3P49916 1009 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 GUCY2DQ02846 1103 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 PPP4R4Q6NUP7 873 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 SCYL3Q8IZE3 742 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 CCNYQ8ND76 341 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 KIAA1468Q9P260 1216 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 MAPK4P31152 587 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 PEX19P40855 299 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 NAA35Q5VZE5 725 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 TTC19Q6DKK2 380 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 DNAAF3Q8N9W5 541 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 MED7O43513 233 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 TRPA1O75762 1119 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 ZBTB41Q5SVQ8 909 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 MIS18BP1Q6P0N0 1132 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 RETREG2Q8NC44 543 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 CFAP36Q96G28 342 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 SLC52A2Q9HAB3 445 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 NUP160Q12769 1436 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 DDAH1O94760 285 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 RASSF7Q02833 373 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 FBXO41Q8TF61 875 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 HAUS4Q9H6D7 363 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 PPP1R12AO14974 1030 aaPredicted RBP13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 CACTINQ8WUQ7 758 aaKnown RBP13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 STK17AQ9UEE5 414 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 SYCP2Q9BX26 1530 aa13.36□□□□□ -0.27
CACNA1C-219ENST00000399649 MAP3K7O43318 606 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 CMTR1Q8N1G2 835 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 GIPC2Q8TF65 315 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 MYO1FO00160 1098 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 MFSD14BQ5SR56 506 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 PPP1R2P3Q6NXS1 205 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 NUDCD1Q96RS6 583 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 TOM1L1O75674 476 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 KRT1P04264 644 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 DARS2Q6PI48 645 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 CCDC24Q8N4L8 307 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 CDC26Q8NHZ8 85 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 ZNF274Q96GC6 653 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 FAM81BQ96LP2 452 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 GCNAQ96QF7 691 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 ZBBXA8MT70 800 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 OSBPP22059 807 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 LONP1P36776 959 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 ARL4AP40617 200 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 CTSWP56202 376 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 FBXW4P57775 412 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 LRCH2Q5VUJ6 765 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 MAGOHBQ96A72 148 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 HOXB7P09629 217 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 YWHAHQ04917 246 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 KCTD6Q8NC69 237 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 ANGPTL2Q9UKU9 493 aa13.35□□□□□ -0.27
CACNA1C-219ENST00000399649 MED23Q9ULK4 1368 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 WDR17Q8IZU2 1322 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 ANXA13P27216 316 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 ARHGEF6Q15052 776 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 SERPINI1Q99574 410 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 AP5M1Q9H0R1 490 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 CHEK2O96017 543 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 SPOPLQ6IQ16 392 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 SEC24BO95487 1268 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 PSMC2P35998 433 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 SGO2Q562F6 1265 aa13.34□□□□□ -0.27
CACNA1C-219ENST00000399649 CCHCR1Q8TD31 782 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms