RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 PUS3Q9BZE2 481 aaKnown RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 TOPORSQ9NS56 1045 aaPredicted RBP8.73□□□□□ -1.01
USP47-203ENST00000399455 CTTNBP2NLQ9P2B4 639 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 ANAPC5Q9UJX4 755 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 NDUFB9Q9Y6M9 179 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 CTAGE15A4D2H0 777 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 CTAGE8P0CG41 777 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 ZNF18P17022 549 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 MARK3P27448 753 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 MYL5Q02045 173 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 MTERF2Q49AM1 385 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 CTAGE6Q86UF2 777 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 CTAGE4Q8IX94 777 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 TRIM7Q9C029 511 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 FAM8A1Q9UBU6 413 aa8.73□□□□□ -1.01
USP47-203ENST00000399455 GBP1P32455 592 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 SFMBT2Q5VUG0 894 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 RNF180Q86T96 592 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 DPF3Q92784 378 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 CUEDC2Q9H467 287 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 FAM184BQ9ULE4 1060 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 DLC1Q96QB1 1528 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 MXRA7P84157 204 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 LGSNQ5TDP6 509 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 MLKLQ8NB16 471 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 FAM49AQ9H0Q0 323 aaPredicted RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 CCL15-CCL14A0A0B4J2E2 113 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 CYP2E1P05181 493 aaPredicted RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 DLATP10515 647 aaKnown RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 ZBTB16Q05516 673 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 CCL15Q16663 113 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 HSP90AA4PQ58FG1 418 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 SCYL2Q6P3W7 929 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 GIMAP6Q6P9H5 292 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 CYP26C1Q6V0L0 522 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 PALM2Q8IXS6 379 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 TRMT44Q8IYL2 757 aaKnown RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 SH3RF3Q8TEJ3 882 aaPredicted RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 AAASQ9NRG9 546 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 AKR1B15C9JRZ8 316 aaPredicted RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 PROSER3Q2NL68 480 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP47-203ENST00000399455 AK8Q96MA6 479 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 TRMT1Q9NXH9 659 aaKnown RBP8.72□□□□□ -1.01
USP47-203ENST00000399455 EPHX2P34913 555 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 RUFY4Q6ZNE9 571 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 USP44Q9H0E7 712 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 DONSONQ9NYP3 566 aa8.72□□□□□ -1.01
USP47-203ENST00000399455 MFAP3P55082 362 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 HLFQ16534 295 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 ADALQ6DHV7 355 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 PPP1R18Q6NYC8 613 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 GBP6Q6ZN66 633 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 EFCAB13Q8IY85 973 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 RSAD2Q8WXG1 361 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 PLCD4Q9BRC7 762 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 GCOM2Q9BZD3 368 aaPredicted RBP8.71□□□□□ -1.01
USP47-203ENST00000399455 RPAP3Q9H6T3 665 aaPredicted RBP8.71□□□□□ -1.01
USP47-203ENST00000399455 GINM1Q9NU53 330 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 NRKQ7Z2Y5 1582 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 CPDO75976 1380 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 MADDQ8WXG6 1647 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 CYP27B1O15528 508 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 TRAPPC10P48553 1259 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 C4orf50Q6ZRC1 276 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 SIX6OS1Q8N1H7 587 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 PARD3BQ8TEW8 1205 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 NUDT12Q9BQG2 462 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 C2orf40Q9H1Z8 148 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 ATP6V0A4Q9HBG4 840 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 hCG_1642624A0A1W2PR95 340 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 SLC16A2P36021 539 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 SPATA33Q96N06 139 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 CCDC68Q9H2F9 335 aa8.71□□□□□ -1.01
USP47-203ENST00000399455 RAVER2Q9HCJ3 691 aaKnown RBP8.71□□□□□ -1.01
USP47-203ENST00000399455 RGS2P41220 211 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 BFSP1Q12934 665 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 ZMYM1Q5SVZ6 1142 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 CCDC84Q86UT8 332 aaPredicted RBP8.71□□□□□ -1.02
USP47-203ENST00000399455 TICAM2Q86XR7 235 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 TTLL11Q8NHH1 800 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 PCDHB4Q9Y5E5 795 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 PPP2R3BQ9Y5P8 575 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 A0A1B0GVL5 298 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 MYL7Q01449 175 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 KRT33BQ14525 404 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 VEPH1Q14D04 833 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 TWF2Q6IBS0 349 aaKnown RBP8.71□□□□□ -1.02
USP47-203ENST00000399455 ANKRD13AQ8IZ07 590 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 TRIM11Q96F44 468 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 RRAGCQ9HB90 399 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 ZNF302Q9NR11 478 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 AFG3L2Q9Y4W6 797 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 ZWINTO95229 277 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 SLC25A27O95847 323 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 IVLP07476 585 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 NNMTP40261 264 aa8.71□□□□□ -1.02
USP47-203ENST00000399455 CPT1AP50416 773 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms