RNA–Protein interactions for RNA: ENST00000399218.8

GAREM1-202, Transcript of GRB2 associated regulator of MAPK1 subtype 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GAREM1, Length 7,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAREM1-202ENST00000399218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.01□□□□□ -0.49
GAREM1-202ENST00000399218 DDTLA6NHG4 134 aaPredicted RBP12□□□□□ -0.49
GAREM1-202ENST00000399218 TTLL4Q14679 1199 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 SWSAP1Q6NVH7 229 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 CLIC2O15247 247 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 AGBL1Q96MI9 1066 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 KIAA1841Q6NSI8 718 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 CDHR1Q96JP9 859 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 CAMKK2Q96RR4 588 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 ATL3Q6DD88 541 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 OXER1Q8TDS5 423 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 ATG4CQ96DT6 458 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 SRRTQ9BXP5 876 aaKnown RBP12□□□□□ -0.49
GAREM1-202ENST00000399218 TFDP1Q14186 410 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 C16orf45Q96MC5 204 aaPredicted RBP12□□□□□ -0.49
GAREM1-202ENST00000399218 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
GAREM1-202ENST00000399218 MTMR6Q9Y217 621 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 COMMD10Q9Y6G5 202 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 ZSCAN12O43309 604 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 GPRC5AQ8NFJ5 357 aa12□□□□□ -0.49
GAREM1-202ENST00000399218 TXNP10599 105 aaKnown RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 TAL1P17542 331 aaPredicted RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 GTF2A2P52657 109 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 EPB41L4AQ9HCS5 686 aaPredicted RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 CDR1P51861 262 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 TMEM62Q0P6H9 643 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 CCDC117Q8IWD4 279 aaPredicted RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 ZNF609O15014 1411 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 CTNND1O60716 968 aaKnown RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 KIF4AO95239 1232 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 SPAG1Q07617 926 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 POLIQ9UNA4 740 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 GPR75-ASB3A0A0A6YYF3 556 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 NDUFA8P51970 172 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 PLCB3Q01970 1234 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 MCM6Q14566 821 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 PTPN14Q15678 1187 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 SMYD4Q8IYR2 804 aaPredicted RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 IL27Q8NEV9 243 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 NEDD1Q8NHV4 660 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 ALS2CR12Q96Q35 445 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 SHTN1A0MZ66 631 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 UPP2O95045 317 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 PGK2P07205 417 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 CTSHP09668 335 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 LIFRP42702 1097 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 BMS1Q14692 1282 aaKnown RBP11.99□□□□□ -0.49
GAREM1-202ENST00000399218 SCYL3Q8IZE3 742 aa11.99□□□□□ -0.49
GAREM1-202ENST00000399218 TM4SF1P30408 202 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 AXDND1Q5T1B0 1012 aaPredicted RBP11.98□□□□□ -0.49
GAREM1-202ENST00000399218 ADGRA1Q86SQ6 560 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 PCDHA7Q9UN72 937 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 CHD2O14647 1828 aaKnown RBP11.98□□□□□ -0.49
GAREM1-202ENST00000399218 POTEMA6NI47 508 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 TOB2Q14106 344 aaPredicted RBP11.98□□□□□ -0.49
GAREM1-202ENST00000399218 CYFIP1Q7L576 1253 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 CCDC112Q8NEF3 446 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 WDR11Q9BZH6 1224 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 CCDC113Q9H0I3 377 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 SYNJ2BP-COX16A0A087WUM0 186 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 C19orf81C9J6K1 198 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 TMEM191BP0C7N4 346 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 IFNAR1P17181 557 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 HSP90B2PQ58FF3 399 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 GOLGA1Q92805 767 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 COX16Q9P0S2 106 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 USTQ9Y2C2 406 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 RPAP1Q9BWH6 1393 aaPredicted RBP11.98□□□□□ -0.49
GAREM1-202ENST00000399218 LARSQ9P2J5 1176 aaKnown RBP11.98□□□□□ -0.49
GAREM1-202ENST00000399218 TNNC2P02585 160 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 RASA1P20936 1047 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 RHPN2Q8IUC4 686 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 MYOCDQ8IZQ8 938 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 TRPM4Q8TD43 1214 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 PIK3C2AO00443 1686 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 GRM4Q14833 912 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 ADALQ6DHV7 355 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 CCDC42Q96M95 316 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 FOXP1Q9H334 677 aaPredicted RBP11.98□□□□□ -0.49
GAREM1-202ENST00000399218 SENP2Q9HC62 589 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 NLRC4Q9NPP4 1024 aa11.98□□□□□ -0.49
GAREM1-202ENST00000399218 ATN1P54259 1190 aaPredicted RBP11.97□□□□□ -0.49
GAREM1-202ENST00000399218 HSP90AA2PQ14568 343 aaPredicted RBP11.97□□□□□ -0.49
GAREM1-202ENST00000399218 C16orf86Q6ZW13 317 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 OTUD6BQ8N6M0 293 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 ZDHHC15Q96MV8 337 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 GABBR1Q9UBS5 961 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.97□□□□□ -0.49
GAREM1-202ENST00000399218 GOLGA8IPA6NC78 632 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 GOLGA8JA6NMD2 632 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 KBTBD13C9JR72 458 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 TNFAIP3P21580 790 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 GUCY1A2P33402 732 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 STOX1Q6ZVD7 989 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 ZFPM1Q8IX07 1006 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 SRBD1Q8N5C6 995 aaKnown RBP11.97□□□□□ -0.49
GAREM1-202ENST00000399218 PRR12Q9ULL5 1215 aa11.97□□□□□ -0.49
GAREM1-202ENST00000399218 DENND3A2RUS2 1198 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms