RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 IQANK1A0A1B0GTG1 560 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 SUN1O94901 812 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 RWDD4Q6NW29 188 aaKnown RBP13.38□□□□□ -0.27
SMU1-201ENST00000397149 ASZ1Q8WWH4 475 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 FAM89AQ96GI7 184 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 ZNF202O95125 648 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 MSH2P43246 934 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 TAF11Q15544 211 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 DARS2Q6PI48 645 aaKnown RBP13.38□□□□□ -0.27
SMU1-201ENST00000397149 NIM1KQ8IY84 436 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 WDR64B1ANS9 1081 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 UBXN8O00124 270 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 NEK2P51955 445 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 DLGAP5Q15398 846 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 RNF219Q5W0B1 726 aaPredicted RBP13.38□□□□□ -0.27
SMU1-201ENST00000397149 ARHGEF18Q6ZSZ5 1173 aa13.38□□□□□ -0.27
SMU1-201ENST00000397149 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.38□□□□□ -0.27
SMU1-201ENST00000397149 BICC1Q9H694 974 aaKnown RBP13.38□□□□□ -0.27
SMU1-201ENST00000397149 SMAD1Q15797 465 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 SMC5Q8IY18 1101 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 ANKRD13CQ8N6S4 541 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 SMYD3Q9H7B4 428 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 RAD18Q9NS91 495 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 LRPPRCP42704 1394 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 EIF4E1BA6NMX2 242 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 PRR23D1E9PI22 279 aaPredicted RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 PRR23D2P0DMB1 279 aaPredicted RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 DMP1Q13316 513 aaPredicted RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 PATL1Q86TB9 770 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 EDEM3Q9BZQ6 932 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 YY1AP1Q9H869 796 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 SEPT9Q9UHD8 586 aaPredicted RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 EIF3CLB5ME19 914 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 CHEK2O96017 543 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 HSPA6P17066 643 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 MRPS15P82914 257 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 GUCY2DQ02846 1103 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 MRPL28Q13084 256 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 TUBB2AQ13885 445 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 TUBB2BQ9BVA1 445 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 CALN1Q9BXU9 219 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 PRPF4O43172 522 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMU1-201ENST00000397149 CAPZA2P47755 286 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 PSMD2Q13200 908 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 SLMAPQ14BN4 828 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 CCDC157Q569K6 752 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 CHMP1BQ7LBR1 199 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 PANK4Q9NVE7 773 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 F5H423 210 aaPredicted RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 NSFP46459 744 aaKnown RBP13.37□□□□□ -0.27
SMU1-201ENST00000397149 GOLGA8KD6RF30 607 aa13.37□□□□□ -0.27
SMU1-201ENST00000397149 KRT17Q04695 432 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 MAP7D3Q8IWC1 876 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 SH3KBP1Q96B97 665 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 CBX8Q9HC52 389 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 KRT87PA6NCN2 255 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 BRD1O95696 1058 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 PPP1R14AQ96A00 147 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 HSPA8P11142 646 aaKnown RBP13.36□□□□□ -0.27
SMU1-201ENST00000397149 UBXN2AP68543 259 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 GOLGA8DPQ0D2H9 430 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 CASS4Q9NQ75 786 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 DNAJC17Q9NVM6 304 aaKnown RBP13.36□□□□□ -0.27
SMU1-201ENST00000397149 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 NLRP12P59046 1061 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 DRP2Q13474 957 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 RRM2BQ7LG56 351 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 KRT25Q7Z3Z0 450 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 ZBTB18Q99592 522 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 KCTD6Q8NC69 237 aa13.36□□□□□ -0.27
SMU1-201ENST00000397149 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
SMU1-201ENST00000397149 ZNF594Q96JF6 807 aaPredicted RBP13.36□□□□□ -0.27
SMU1-201ENST00000397149 SMCO2A6NFE2 343 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 ZMYND10O75800 440 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 PDXDC1Q6P996 788 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 MAGOHBQ96A72 148 aaKnown RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 SPZ1Q9BXG8 430 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 USP26Q9BXU7 913 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 UPF3AQ9H1J1 476 aaKnown RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 L3MBTL1Q9Y468 752 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 COPG1Q9Y678 874 aaKnown RBP13.35□□□□□ -0.27
SMU1-201ENST00000397149 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 NPHP3Q7Z494 1330 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 CFAP69A5D8W1 941 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 KITP10721 976 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 IMPDH2P12268 514 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 POLA2Q14181 598 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 KSR2Q6VAB6 950 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 FAM178BQ8IXR5 827 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 ZNF507Q8TCN5 953 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 RNF139Q8WU17 664 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 TRIM8Q9BZR9 551 aa13.35□□□□□ -0.27
SMU1-201ENST00000397149 DMAP1Q9NPF5 467 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms