RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 UNC80Q8N2C7 3258 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 TXNP10599 105 aaKnown RBP21.95■■□□□ 1.1
MCF2L-207ENST00000397024 ANTXR2P58335 489 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 PPP2R5BQ15173 497 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 ZNF697Q5TEC3 545 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 CCDC62Q6P9F0 684 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 NSUN6Q8TEA1 469 aaKnown RBP21.95■■□□□ 1.1
MCF2L-207ENST00000397024 PPP1R13LQ8WUF5 828 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 MPHOSPH6Q99547 160 aaKnown RBP21.95■■□□□ 1.1
MCF2L-207ENST00000397024 MAF1Q9H063 256 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 POLR3EQ9NVU0 708 aa21.95■■□□□ 1.1
MCF2L-207ENST00000397024 CPT1AP50416 773 aa21.94■■□□□ 1.1
MCF2L-207ENST00000397024 PPIGQ13427 754 aaKnown RBP eCLIP21.94■■□□□ 1.11e-8■■□□□ 14
MCF2L-207ENST00000397024 GRM4Q14833 912 aa21.94■■□□□ 1.1
MCF2L-207ENST00000397024 SKAP1Q86WV1 359 aa21.94■■□□□ 1.1
MCF2L-207ENST00000397024 MCF2L2Q86YR7 1114 aa21.94■■□□□ 1.1
MCF2L-207ENST00000397024 TMEM199Q8N511 208 aa21.94■■□□□ 1.1
MCF2L-207ENST00000397024 RMDN3Q96TC7 470 aa21.94■■□□□ 1.1
MCF2L-207ENST00000397024 AMNQ9BXJ7 453 aa21.94■■□□□ 1.1
MCF2L-207ENST00000397024 ALDH8A1Q9H2A2 487 aaPredicted RBP21.94■■□□□ 1.1
MCF2L-207ENST00000397024 RBM8AQ9Y5S9 174 aaKnown RBP21.94■■□□□ 1.1
MCF2L-207ENST00000397024 PRUNE2Q8WUY3 3088 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 A6NJR5 290 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 B4DLN1 442 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 ZBTB5O15062 677 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 NKRFO15226 690 aaKnown RBP eCLIP21.93■■□□□ 1.1
MCF2L-207ENST00000397024 CFBP00751 764 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 MRPL12P52815 198 aaKnown RBP21.93■■□□□ 1.1
MCF2L-207ENST00000397024 TROAPQ12815 778 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 COL9A3Q14050 684 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-207ENST00000397024 SEPT14Q6ZU15 432 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 ZNF365Q70YC5 407 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 NCOA7Q8NI08 942 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 IGDCC4Q8TDY8 1250 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 MTG1Q9BT17 334 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-207ENST00000397024 NOC4LQ9BVI4 516 aaKnown RBP21.93■■□□□ 1.1
MCF2L-207ENST00000397024 SEZ6LQ9BYH1 1024 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 HIPK3Q9H422 1215 aa21.93■■□□□ 1.1
MCF2L-207ENST00000397024 GPHNQ9NQX3 736 aaPredicted RBP21.93■■□□□ 1.1
MCF2L-207ENST00000397024 TRMT13Q9NUP7 481 aaKnown RBP21.93■■□□□ 1.1
MCF2L-207ENST00000397024 CHD9Q3L8U1 2897 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 CYTH3O43739 400 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 EIF2AK2P19525 551 aaKnown RBP21.92■■□□□ 1.1
MCF2L-207ENST00000397024 HSD17B4P51659 736 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 CCL23P55773 120 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 TTLL4Q14679 1199 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 LY6KQ17RY6 165 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 NBPF20Q3BBV1 942 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 RASIP1Q5U651 963 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 RALYLQ86SE5 291 aaKnown RBP21.92■■□□□ 1.1
MCF2L-207ENST00000397024 MB21D2Q8IYB1 491 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-207ENST00000397024 PIGSQ96S52 555 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 IWS1Q96ST2 819 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 CDX2Q99626 313 aaPredicted RBP21.92■■□□□ 1.1
MCF2L-207ENST00000397024 RIOX1Q9H6W3 641 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 PCDHA1Q9Y5I3 950 aa21.92■■□□□ 1.1
MCF2L-207ENST00000397024 SCN10AQ9Y5Y9 1956 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.91■■□□□ 1.1
MCF2L-207ENST00000397024 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.91■■□□□ 1.1
MCF2L-207ENST00000397024 GRXCR1A8MXD5 290 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 WTAPQ15007 396 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 STXBP2Q15833 593 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 TMEM67Q5HYA8 995 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 ARHGEF16Q5VV41 709 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 HOMER1Q86YM7 354 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 VWCEQ96DN2 955 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 LSG1Q9H089 658 aaKnown RBP21.91■■□□□ 1.1
MCF2L-207ENST00000397024 WNT8AQ9H1J5 351 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 IL23AQ9NPF7 189 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 PXMP2Q9NR77 195 aa21.91■■□□□ 1.1
MCF2L-207ENST00000397024 ERICH2A1L162 156 aa21.9■■□□□ 1.1
MCF2L-207ENST00000397024 NR3C2P08235 984 aa21.9■■□□□ 1.1
MCF2L-207ENST00000397024 CYP2C9P11712 490 aa21.9■■□□□ 1.1
MCF2L-207ENST00000397024 GHRHRQ02643 423 aa21.9■■□□□ 1.1
MCF2L-207ENST00000397024 ARHGAP1Q07960 439 aa21.9■■□□□ 1.1
MCF2L-207ENST00000397024 AFG1LQ8WV93 481 aa21.9■■□□□ 1.1
MCF2L-207ENST00000397024 KIAA1217Q5T5P2 1943 aa21.9■■□□□ 1.1
MCF2L-207ENST00000397024 HOXA13P31271 388 aaPredicted RBP21.89■■□□□ 1.09
MCF2L-207ENST00000397024 BRDTQ58F21 947 aaPredicted RBP21.89■■□□□ 1.09
MCF2L-207ENST00000397024 CXXC1Q9P0U4 656 aaPredicted RBP21.89■■□□□ 1.09
MCF2L-207ENST00000397024 KPNA6O60684 536 aa21.88■■□□□ 1.09
MCF2L-207ENST00000397024 SCLYQ96I15 445 aa21.88■■□□□ 1.09
MCF2L-207ENST00000397024 ESYT1Q9BSJ8 1104 aa21.88■■□□□ 1.09
MCF2L-207ENST00000397024 LY9Q9HBG7 655 aa21.88■■□□□ 1.09
MCF2L-207ENST00000397024 DDX41Q9UJV9 622 aaKnown RBP21.88■■□□□ 1.09
MCF2L-207ENST00000397024 EIF3JO75822 258 aaKnown RBP21.87■■□□□ 1.09
MCF2L-207ENST00000397024 RGS20O76081 388 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 GH1P01241 217 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 FGBP02675 491 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 DNAJB2P25686 324 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 PBX2P40425 430 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 SART3Q15020 963 aaKnown RBP21.87■■□□□ 1.09
MCF2L-207ENST00000397024 FAM47CQ5HY64 1035 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 PSRC1Q6PGN9 363 aaPredicted RBP21.87■■□□□ 1.09
MCF2L-207ENST00000397024 CATIPQ7Z7H3 387 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 MYLIPQ8WY64 445 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 HERVK_113Q902F9 699 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 MYL10Q9BUA6 226 aa21.87■■□□□ 1.09
MCF2L-207ENST00000397024 PNMA6FA0A0J9YX94 578 aa21.86■■□□□ 1.09
MCF2L-207ENST00000397024 SLC27A2O14975 620 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms