RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 ADAMTS3O15072 1205 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 SLF1Q9BQI6 1058 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 DGKZQ13574 1117 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 FAM26FQ5R3K3 315 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 MIER3Q7Z3K6 550 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
MCF2L-205ENST00000397017 B4DLN1 442 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 RGL2O15211 777 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 SLC37A4O43826 429 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 PRCPP42785 496 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 HS2ST1Q7LGA3 356 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 SMCR8Q8TEV9 937 aaPredicted RBP16.93■□□□□ 0.3
MCF2L-205ENST00000397017 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 TBC1D5Q92609 795 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 RGL1Q9NZL6 768 aa16.93■□□□□ 0.3
MCF2L-205ENST00000397017 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 ARL6IP4Q66PJ3 421 aaKnown RBP16.92■□□□□ 0.3
MCF2L-205ENST00000397017 ABCB11O95342 1321 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 WNT10BO00744 389 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 SKIDA1Q1XH10 827 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 NBPF12Q5TAG4 269 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-205ENST00000397017 DCAF4Q8WV16 495 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 PDLIM2Q96JY6 352 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 AGBL1Q96MI9 1066 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 GLIS2Q9BZE0 524 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-205ENST00000397017 HACL1Q9UJ83 578 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 TEX33O43247 280 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 CASP14P31944 242 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 CYP2J2P51589 502 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 TMED8Q6PL24 325 aaPredicted RBP16.92■□□□□ 0.3
MCF2L-205ENST00000397017 HERC5Q9UII4 1024 aaKnown RBP16.92■□□□□ 0.3
MCF2L-205ENST00000397017 PKD1L3Q7Z443 1732 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 ATRNO75882 1429 aa16.92■□□□□ 0.3
MCF2L-205ENST00000397017 CLIC2O15247 247 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 NOP2P46087 812 aaKnown RBP16.91■□□□□ 0.3
MCF2L-205ENST00000397017 DDX12PQ92771 950 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
MCF2L-205ENST00000397017 CCDC42Q96M95 316 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 CAMKK2Q96RR4 588 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 ZMYND12Q9H0C1 365 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 MACROD2A1Z1Q3 448 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 ENTPD3O75355 529 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 ZNF569Q5MCW4 686 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 SLC16A10Q8TF71 515 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 MTFR1LQ9H019 292 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 NPHP3-ACAD11A0A0J9YXS1 232 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 LDHDQ86WU2 507 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 MYOCDQ8IZQ8 938 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 NT5C3AQ9H0P0 336 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 SPON1Q9HCB6 807 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 GAKO14976 1311 aa16.91■□□□□ 0.3
MCF2L-205ENST00000397017 A0A087X0B3 334 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 USO1O60763 962 aaKnown RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 CCDC175P0C221 793 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 PTPROQ16827 1216 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 NLRX1Q86UT6 975 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 TRIML1Q8N9V2 468 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 ZNF579Q8NAF0 562 aaKnown RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 PSMB7Q99436 277 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 PDS5AQ29RF7 1337 aaKnown RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 RIOK3O14730 519 aaKnown RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 NEK11Q8NG66 645 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 OTUD5Q96G74 571 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 FUCA2Q9BTY2 467 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 COL16A1Q07092 1604 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 NHSL1Q5SYE7 1610 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 FOSP01100 380 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 PLA2G4BP0C869 781 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 JADE2Q9NQC1 790 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 NYAP2Q9P242 653 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 PUF60Q9UHX1 559 aaKnown RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 DDNO94850 711 aaPredicted RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 CCDC181Q5TID7 509 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 SEPT14Q6ZU15 432 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 NAP1L4Q99733 375 aaKnown RBP16.9■□□□□ 0.3
MCF2L-205ENST00000397017 AS3MTQ9HBK9 375 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 RABGAP1Q9Y3P9 1069 aa16.9■□□□□ 0.3
MCF2L-205ENST00000397017 CETN3O15182 167 aa16.89■□□□□ 0.29
MCF2L-205ENST00000397017 UTP14CQ5TAP6 766 aaKnown RBP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 COPB1P53618 953 aaKnown RBP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 ZNF658Q5TYW1 1059 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 SLFN12Q8IYM2 578 aa16.89■□□□□ 0.29
MCF2L-205ENST00000397017 BANK1Q8NDB2 785 aa16.89■□□□□ 0.29
MCF2L-205ENST00000397017 CYP2W1Q8TAV3 490 aa16.89■□□□□ 0.29
MCF2L-205ENST00000397017 CAPZA3Q96KX2 299 aa16.89■□□□□ 0.29
MCF2L-205ENST00000397017 CNOT6LQ96LI5 555 aaKnown RBP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 ACTN4O43707 911 aaKnown RBP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 XKR9Q5GH70 373 aa16.89■□□□□ 0.29
MCF2L-205ENST00000397017 ENOX1Q8TC92 643 aaKnown RBP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 TUBGCP2Q9BSJ2 902 aa16.89■□□□□ 0.29
MCF2L-205ENST00000397017 RPAP3Q9H6T3 665 aaPredicted RBP16.89■□□□□ 0.29
MCF2L-205ENST00000397017 LAD1O00515 517 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 IKBKBO14920 756 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 PRPF6O94906 941 aaKnown RBP16.88■□□□□ 0.29
MCF2L-205ENST00000397017 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 AK8Q96MA6 479 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 RIC8AQ9NPQ8 531 aa16.88■□□□□ 0.29
MCF2L-205ENST00000397017 TAF1P21675 1872 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms