RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 TOM1L1O75674 476 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 NCF2P19878 526 aaPredicted RBP15.16■□□□□ 0.02
COL4A3-202ENST00000396578 XKR9Q5GH70 373 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 NBPF3Q9H094 633 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
COL4A3-202ENST00000396578 ECEL1O95672 775 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 TMOD1P28289 359 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 CASP14P31944 242 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 FAM47AQ5JRC9 791 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 G2E3Q7L622 706 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 SRRM1Q8IYB3 904 aaKnown RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 RETREG2Q8NC44 543 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 GDAP1Q8TB36 358 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 CHURC1Q8WUH1 139 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 HOXB7P09629 217 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 TCP11X2Q5H9J9 407 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 MAPKAPK5Q8IW41 473 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 MAML1Q92585 1016 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 FMO2Q99518 471 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 SUCLA2Q9P2R7 463 aaPredicted RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 SOS2Q07890 1332 aaPredicted RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 TYW5A2RUC4 315 aaKnown RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 POLGP54098 1239 aaPredicted RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 IFRD2Q12894 506 aaPredicted RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 USP28Q96RU2 1077 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 RAP1GDS1P52306 607 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 NUDCD3Q8IVD9 361 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 FAM81BQ96LP2 452 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 KIF21AQ7Z4S6 1674 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 UGGT2Q9NYU1 1516 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 SLMAPQ14BN4 828 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 OLA1Q9NTK5 396 aaKnown RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 TBK1Q9UHD2 729 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 MAPKBP1O60336 1514 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 PLXNC1O60486 1568 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 ESRRAP11474 423 aaPredicted RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 ARHGDIAP52565 204 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 EIF3BP55884 814 aaKnown RBP15.15■□□□□ 0.02
COL4A3-202ENST00000396578 TBC1D22AQ8WUA7 517 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 TLK1Q9UKI8 766 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 ZMYND10O75800 440 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 ZAP70P43403 619 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 PLTPP55058 493 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 CYP4F22Q6NT55 531 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 BBS5Q8N3I7 341 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 TRIML2Q8N7C3 387 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 RNF14Q9UBS8 474 aa15.15■□□□□ 0.02
COL4A3-202ENST00000396578 ADCY9O60503 1353 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 SYNJ2BP-COX16A0A087WUM0 186 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 DCTN3O75935 186 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 DEPDC1BQ8WUY9 529 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 PGBD1Q96JS3 809 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 C8orf37Q96NL8 207 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 CUEDC2Q9H467 287 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 COX16Q9P0S2 106 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 NR1D1P20393 614 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 CCDC127Q96BQ5 260 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 H3BRJ5 948 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 PTGDRQ13258 359 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 PPP1R2P3Q6NXS1 205 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 MYLK4Q86YV6 388 aaPredicted RBP15.14■□□□□ 0.01
COL4A3-202ENST00000396578 TRIM59Q8IWR1 403 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 DNAAF3Q8N9W5 541 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 MLXIPQ9HAP2 919 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 FRMPD2Q68DX3 1309 aaPredicted RBP15.14■□□□□ 0.01
COL4A3-202ENST00000396578 PNMA6EA0A0J9YXQ4 647 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 UHRF1BP1LA0JNW5 1464 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 CCDC151A5D8V7 595 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 SPDYE2BA6NHP3 402 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 LAD1O00515 517 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 MT-ND3P03897 115 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 SPDYE6P0CI01 402 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 NNTQ13423 1086 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 KLC3Q6P597 504 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 ZC3H18Q86VM9 953 aaKnown RBP15.14■□□□□ 0.01
COL4A3-202ENST00000396578 TEKT3Q9BXF9 490 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 STK17AQ9UEE5 414 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 NDUFB9Q9Y6M9 179 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 EXOC1LA0A1B0GW35 172 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 PFKFB2O60825 505 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 NPR1P16066 1061 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 ATP5JP18859 108 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 PTPREP23469 700 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 ZNF827Q17R98 1081 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 PCDHA7Q9UN72 937 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 RGS12O14924 1447 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 ACTN1P12814 892 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 KRT10P13645 584 aa15.14■□□□□ 0.01
COL4A3-202ENST00000396578 CMTR1Q8N1G2 835 aaKnown RBP15.14■□□□□ 0.01
COL4A3-202ENST00000396578 A0A1W2PP64 1363 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 MAP3K7CLP57077 242 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 DPP8Q6V1X1 898 aaPredicted RBP15.13■□□□□ 0.01
COL4A3-202ENST00000396578 EYA1Q99502 592 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 ADCY1Q08828 1119 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 GRAMD1BQ3KR37 738 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 SLC5A4Q9NY91 659 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 CAPN11Q9UMQ6 739 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 FIS1Q9Y3D6 152 aa15.13■□□□□ 0.01
COL4A3-202ENST00000396578 POLR2MP0CAP2 368 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms