RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 MAGEC2Q9UBF1 373 aaPredicted RBP18.53■□□□□ 0.56
TRIM39-205ENST00000396551 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
TRIM39-205ENST00000396551 ECM1Q16610 540 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 TMEM119Q4V9L6 283 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 SIAH1Q8IUQ4 282 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 SNX29Q8TEQ0 813 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 CNOT6LQ96LI5 555 aaKnown RBP18.53■□□□□ 0.56
TRIM39-205ENST00000396551 IDI2Q9BXS1 227 aa18.53■□□□□ 0.56
TRIM39-205ENST00000396551 ZNF219Q9P2Y4 722 aaPredicted RBP18.53■□□□□ 0.56
TRIM39-205ENST00000396551 BICDL2A1A5D9 508 aa18.52■□□□□ 0.56
TRIM39-205ENST00000396551 PES1O00541 588 aaKnown RBP18.52■□□□□ 0.56
TRIM39-205ENST00000396551 CNNM4Q6P4Q7 775 aa18.52■□□□□ 0.56
TRIM39-205ENST00000396551 RAD54LQ92698 747 aa18.52■□□□□ 0.56
TRIM39-205ENST00000396551 MKL1Q969V6 931 aa18.52■□□□□ 0.56
TRIM39-205ENST00000396551 DDX25Q9UHL0 483 aaKnown RBP18.52■□□□□ 0.56
TRIM39-205ENST00000396551 RASSF10A6NK89 507 aa18.52■□□□□ 0.55
TRIM39-205ENST00000396551 EFCAB8A8MWE9 144 aa18.52■□□□□ 0.55
TRIM39-205ENST00000396551 FKBP1AP62942 108 aaKnown RBP18.52■□□□□ 0.55
TRIM39-205ENST00000396551 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.55
TRIM39-205ENST00000396551 UNC13DQ70J99 1090 aa18.52■□□□□ 0.55
TRIM39-205ENST00000396551 UBXN4Q92575 508 aa18.52■□□□□ 0.55
TRIM39-205ENST00000396551 DHX36Q9H2U1 1008 aaKnown RBP18.52■□□□□ 0.55
TRIM39-205ENST00000396551 PSTPIP2Q9H939 334 aa18.52■□□□□ 0.55
TRIM39-205ENST00000396551 DNM2P50570 870 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 RBM5P52756 815 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRIM39-205ENST00000396551 MRPL12P52815 198 aaKnown RBP18.51■□□□□ 0.55
TRIM39-205ENST00000396551 CERKLQ49MI3 558 aaPredicted RBP18.51■□□□□ 0.55
TRIM39-205ENST00000396551 DYMQ7RTS9 669 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 CDK5RAP3Q96JB5 506 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 ARHGAP25P42331 645 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 PPP2R3AQ06190 1150 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 MIIPQ5JXC2 388 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 DNAJC7Q99615 494 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 TTYH3Q9C0H2 523 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 NYAP2Q9P242 653 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 CAPN11Q9UMQ6 739 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 PPP1R2P41236 205 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 KLK7P49862 253 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 CENPPQ6IPU0 288 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 SLF1Q9BQI6 1058 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 RAB34Q9BZG1 259 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 PI4KBQ9UBF8 816 aa18.51■□□□□ 0.55
TRIM39-205ENST00000396551 REXO2Q9Y3B8 237 aaKnown RBP18.51■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L15C9J2P7 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L13C9JLJ4 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L11C9JVI0 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L18D6R9N7 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L22D6RA61 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L17D6RBQ6 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L19D6RCP7 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L20D6RJB6 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 RAD21O60216 631 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 HDLBPQ00341 1268 aaKnown RBP18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L24Q0WX57 530 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 SEPT2Q15019 361 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 KRT79Q5XKE5 535 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 WDR59Q6PJI9 974 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 USP17L6PQ6QN14 398 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 PVALEFA0A1B0GWK0 134 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 KIF5CO60282 957 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 CLCN6P51797 869 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 SLFN13Q68D06 897 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 STYK1Q6J9G0 422 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 TATDN1Q6P1N9 297 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 OR8K1Q8NGG5 319 aa18.5■□□□□ 0.55
TRIM39-205ENST00000396551 GTPBP4Q9BZE4 634 aaKnown RBP18.5■□□□□ 0.55
TRIM39-205ENST00000396551 LUC7L2Q9Y383 392 aaKnown RBP18.5■□□□□ 0.55
TRIM39-205ENST00000396551 CHRNA5P30532 468 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 ZNF569Q5MCW4 686 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 DCAF4Q8WV16 495 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 EPC1Q9H2F5 836 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 KANSL2Q9H9L4 492 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 PRDM10Q9NQV6 1147 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 SLC1A4P43007 532 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 ZSCAN29Q8IWY8 852 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-205ENST00000396551 FAM53CQ9NYF3 392 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 H0YIN7 160 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 EHHADHQ08426 723 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 CDC37Q16543 378 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-205ENST00000396551 RSRC2Q7L4I2 434 aaKnown RBP18.49■□□□□ 0.55
TRIM39-205ENST00000396551 SMAP1Q8IYB5 467 aaPredicted RBP18.49■□□□□ 0.55
TRIM39-205ENST00000396551 SLC35F6Q8N357 371 aa18.49■□□□□ 0.55
TRIM39-205ENST00000396551 AOC3Q16853 763 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 FAM114A1Q8IWE2 563 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 DDX12PQ92771 950 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 UIMC1Q96RL1 719 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 AGPAT5Q9NUQ2 364 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 PCDHA1Q9Y5I3 950 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 EPN1Q9Y6I3 576 aaPredicted RBP18.48■□□□□ 0.55
TRIM39-205ENST00000396551 NDUFA10O95299 355 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 GDF11O95390 407 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 GCFC2P16383 781 aaKnown RBP18.48■□□□□ 0.55
TRIM39-205ENST00000396551 MTIF2P46199 727 aaKnown RBP18.48■□□□□ 0.55
TRIM39-205ENST00000396551 JAG1P78504 1218 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 TBC1D8BQ0IIM8 1120 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 GLIS3Q8NEA6 775 aa18.48■□□□□ 0.55
TRIM39-205ENST00000396551 P2RX7Q99572 595 aaKnown RBP18.48■□□□□ 0.55
TRIM39-205ENST00000396551 TNS1Q9HBL0 1735 aaKnown RBP18.48■□□□□ 0.55
TRIM39-205ENST00000396551 NOC4LQ9BVI4 516 aaKnown RBP18.47■□□□□ 0.55
TRIM39-205ENST00000396551 SERPINA10Q9UK55 444 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms