RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 LRRC41Q15345 812 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 ANKRD40Q6AI12 368 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 CERS5Q8N5B7 392 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 FAM207AQ9NSI2 230 aaPredicted RBP12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L15C9J2P7 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L13C9JLJ4 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L11C9JVI0 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L18D6R9N7 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L22D6RA61 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L17D6RBQ6 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L19D6RCP7 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L20D6RJB6 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L24Q0WX57 530 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 CDC37Q16543 378 aaPredicted RBP12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 USP17L6PQ6QN14 398 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 KDM3AQ9Y4C1 1321 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 SLC37A4O43826 429 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 ECE2O60344 883 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 GCFC2P16383 781 aaKnown RBP12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 PMS1P54277 932 aaKnown RBP12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 HERC4Q5GLZ8 1057 aaPredicted RBP12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 UNC13DQ70J99 1090 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 GPR161Q8N6U8 529 aaKnown RBP12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 PPIP5K2O43314 1243 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 NDUFA10O95299 355 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 KIF5AQ12840 1032 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 PRR16Q569H4 304 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 HAUS3Q68CZ6 603 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 NEK11Q8NG66 645 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 JAKMIP2Q96AA8 810 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
PDXDC1-202ENST00000396410 SNAP25P60880 206 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 TUBB2AQ13885 445 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 SEPT2Q15019 361 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 NELFCDQ8IXH7 590 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 RAD54LQ92698 747 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 TUBB2BQ9BVA1 445 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 JADE2Q9NQC1 790 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 CASZ1Q86V15 1759 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 M0R2N6 131 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 CLCN6P51797 869 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 ENOX2Q16206 610 aaKnown RBP12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 QRICH1Q2TAL8 776 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 OGFOD1Q8N543 542 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 LRRN4CLQ8ND94 238 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 DDX12PQ92771 950 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 AMNQ9BXJ7 453 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 MACROD2A1Z1Q3 448 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 RHOXF2BP0C7M4 288 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 SHMT1P34896 483 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 FBXO11Q86XK2 927 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 CNKSR1Q969H4 720 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 RHOXF2Q9BQY4 288 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 ZMYND15Q9H091 742 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 VEZTQ9HBM0 779 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 DDX41Q9UJV9 622 aaKnown RBP12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 CDC23Q9UJX2 597 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 MRFAP1Q9Y605 127 aa12.86□□□□□ -0.35
PDXDC1-202ENST00000396410 GPBP1Q86WP2 473 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 TXLNBQ8N3L3 684 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 HDAC9Q9UKV0 1011 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 CTDP1Q9Y5B0 961 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 SNED1Q8TER0 1413 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 A0A1W2PQC6 194 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 PDIA5Q14554 519 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 GJA10Q969M2 543 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 CHP1Q99653 195 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 ANO3Q9BYT9 981 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 LUC7LQ9NQ29 371 aaKnown RBP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 RNF216Q9NWF9 866 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 MYMKA6NI61 221 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 FXR2P51116 673 aaKnown RBP eCLIP12.85□□□□□ -0.357e-14■■□□□ 12.6
PDXDC1-202ENST00000396410 FAM26FQ5R3K3 315 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 CCDC84Q86UT8 332 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 SPICE1Q8N0Z3 855 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 RETREG2Q8NC44 543 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 DCAF4Q8WV16 495 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 CSRNP1Q96S65 589 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 HAUS4Q9H6D7 363 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 TDRD3Q9H7E2 651 aaKnown RBP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 LRRC10BA6NIK2 292 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 POLR3GO15318 223 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 MAP3K9P80192 1104 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 CACNB1Q02641 598 aaPredicted RBP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 GRB10Q13322 594 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 SLFN12Q8IYM2 578 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 CAPZA3Q96KX2 299 aa12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.85□□□□□ -0.35
PDXDC1-202ENST00000396410 TCP10L2B9ZVM9 353 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 KLRC4O43908 158 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 TADA3O75528 432 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 AOC3Q16853 763 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 CCDC93Q567U6 631 aa12.84□□□□□ -0.35
PDXDC1-202ENST00000396410 TMEM179Q6ZVK1 233 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms