RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 SH2D4AQ9H788 454 aa17.49■□□□□ 0.39
HOXA3-202ENST00000396352 MYO1CO00159 1063 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 LCA5LO95447 670 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 BAG3O95817 575 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 GNA11P29992 359 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 VWA3BQ502W6 1294 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 USP17L2Q6R6M4 530 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 GDAP1L1Q96MZ0 367 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 SELENOOQ9BVL4 669 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 RTFDC1Q9BY42 306 aaPredicted RBP17.48■□□□□ 0.39
HOXA3-202ENST00000396352 MYH10P35580 1976 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 GSTO1P78417 241 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 CCDC96Q2M329 555 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 LRRC31Q6UY01 552 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 BARGINQ6ZT62 677 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 JRKLQ9Y4A0 524 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 PCDHA13Q9Y5I0 950 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 MYMKA6NI61 221 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 SPA17Q15506 151 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 C16orf86Q6ZW13 317 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 TRIM58Q8NG06 486 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 RIN2Q8WYP3 895 aaPredicted RBP17.48■□□□□ 0.39
HOXA3-202ENST00000396352 RRP36Q96EU6 259 aaKnown RBP17.48■□□□□ 0.39
HOXA3-202ENST00000396352 PNMA5Q96PV4 448 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 IFIH1Q9BYX4 1025 aaKnown RBP17.48■□□□□ 0.39
HOXA3-202ENST00000396352 NDST4Q9H3R1 872 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 NHSQ6T4R5 1651 aa17.48■□□□□ 0.39
HOXA3-202ENST00000396352 AGPSO00116 658 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 CDK8P49336 464 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 C2CD5Q86YS7 1000 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 CALML4Q96GE6 196 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 EYA3Q99504 573 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 MLXIPQ9HAP2 919 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 TMEM260Q9NX78 707 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 RRP15Q9Y3B9 282 aaKnown RBP17.47■□□□□ 0.39
HOXA3-202ENST00000396352 KIF11P52732 1056 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 ORC2Q13416 577 aaPredicted RBP17.47■□□□□ 0.39
HOXA3-202ENST00000396352 AENQ8WTP8 325 aaKnown RBP17.47■□□□□ 0.39
HOXA3-202ENST00000396352 PIGSQ96S52 555 aa17.47■□□□□ 0.39
HOXA3-202ENST00000396352 FAM207AQ9NSI2 230 aaPredicted RBP17.47■□□□□ 0.39
HOXA3-202ENST00000396352 BIN2Q9UBW5 565 aaPredicted RBP17.47■□□□□ 0.39
HOXA3-202ENST00000396352 GGCXP38435 758 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 TPTE2Q6XPS3 522 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 UNC13DQ70J99 1090 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 SV2BQ7L1I2 683 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 MMGT1Q8N4V1 131 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 NEDD1Q8NHV4 660 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 AFAP1L1Q8TED9 768 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 TRIM66O15016 1216 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 EDIL3O43854 480 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 TXKP42681 527 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 IQCEQ6IPM2 695 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 REXO1Q8N1G1 1221 aaKnown RBP17.46■□□□□ 0.39
HOXA3-202ENST00000396352 ANKIB1Q9P2G1 1089 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 ABCB11O95342 1321 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 MOCS3O95396 460 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 EIF4A3P38919 411 aaKnown RBP17.46■□□□□ 0.39
HOXA3-202ENST00000396352 ITIH3Q06033 890 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 STK17AQ9UEE5 414 aa17.46■□□□□ 0.39
HOXA3-202ENST00000396352 PVALEFA0A1B0GWK0 134 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 ESYT2A0FGR8 921 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 PRLRP16471 622 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 SMARCA1P28370 1054 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 FXR2P51116 673 aaKnown RBP eCLIP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 EZH2Q15910 746 aaKnown RBP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 MAN2A1Q16706 1144 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 HDAC7Q8WUI4 952 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 SEC63Q9UGP8 760 aaKnown RBP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 LRRC53A6NM62 1247 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 SLC37A4O43826 429 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 USO1O60763 962 aaKnown RBP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 TACC1O75410 805 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 NFIXQ14938 502 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 LRRC55Q6ZSA7 311 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 GUF1Q8N442 669 aaKnown RBP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 BAP1Q92560 729 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 LARP4BQ92615 738 aaKnown RBP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 CEP95Q96GE4 821 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 ZNF287Q9HBT7 754 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 FOCADQ5VW36 1801 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 RPS6KA4O75676 772 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 NOVP48745 357 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 GPR101Q96P66 508 aaPredicted RBP17.45■□□□□ 0.38
HOXA3-202ENST00000396352 VAT1LQ9HCJ6 419 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 LEMD3Q9Y2U8 911 aa17.45■□□□□ 0.38
HOXA3-202ENST00000396352 BTDP43251 543 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 EHHADHQ08426 723 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 CALCRLQ16602 461 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 DYMQ7RTS9 669 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 DRC1Q96MC2 740 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 OSBPL9Q96SU4 736 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 SALL4Q9UJQ4 1053 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 CRACR2AQ9BSW2 395 aa17.44■□□□□ 0.38
HOXA3-202ENST00000396352 LRRC1Q9BTT6 524 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms