RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 IQCKQ8N0W5 287 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 EIF1ADQ8N9N8 165 aaKnown RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 PRPF38AQ8NAV1 312 aaKnown RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 KAT2BQ92831 832 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 MYCBPQ99417 103 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 NUCKS1Q9H1E3 243 aaKnown RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 OR52Z1P0C646 297 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 MAGEA1P43355 309 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 STK4Q13043 487 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 ASTE1Q2TB18 679 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 LRRC15Q8TF66 581 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 ARL8AQ96BM9 186 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 DRC1Q96MC2 740 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 TLR10Q9BXR5 811 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 NDST4Q9H3R1 872 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 DCP1AQ9NPI6 582 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 NDUFAB1O14561 156 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 KIAA0754O94854 1291 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 PLEKP08567 350 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 EVA1CP58658 441 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 KRT25Q7Z3Z0 450 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 SMCR8Q8TEV9 937 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 SYN2Q92777 582 aaPredicted RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 ZIM3Q96PE6 472 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 LUC7LQ9NQ29 371 aaKnown RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 MYH10P35580 1976 aa9.64□□□□□ -0.87
BDNF-204ENST00000395980 BAZ2BQ9UIF8 2168 aaKnown RBP9.64□□□□□ -0.87
BDNF-204ENST00000395980 PVALEFA0A1B0GWK0 134 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 NTSR2O95665 410 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 HNRNPH1P31943 449 aaKnown RBP9.63□□□□□ -0.87
BDNF-204ENST00000395980 LRRC63Q05C16 580 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 CAVIN4Q5BKX8 364 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 CFAP58Q5T655 872 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 BRINP3Q76B58 766 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 LZTS2Q9BRK4 669 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 BARHL2Q9NY43 387 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 TSPY2A6NKD2 308 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 NMT2O60551 498 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 ADAMTS2O95450 1211 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 INF2Q27J81 1249 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 PDXDC1Q6P996 788 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 ZNF384Q8TF68 577 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 BAP1Q92560 729 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 EPN3Q9H201 632 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 EHD4Q9H223 541 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 A1CFQ9NQ94 594 aaKnown RBP9.63□□□□□ -0.87
BDNF-204ENST00000395980 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 MEFVO15553 781 aaPredicted RBP9.63□□□□□ -0.87
BDNF-204ENST00000395980 KLHDC7AQ5VTJ3 777 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 RPAINQ86UA6 219 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 GUF1Q8N442 669 aaKnown RBP9.63□□□□□ -0.87
BDNF-204ENST00000395980 KIAA0895Q8NCT3 520 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 RASGRP4Q8TDF6 673 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 GPKOWQ92917 476 aaPredicted RBP eCLIP9.63□□□□□ -0.87
BDNF-204ENST00000395980 NSUN4Q96CB9 384 aaKnown RBP9.63□□□□□ -0.87
BDNF-204ENST00000395980 SEMA6BQ9H3T3 888 aa9.63□□□□□ -0.87
BDNF-204ENST00000395980 RBM12Q9NTZ6 932 aaKnown RBP9.63□□□□□ -0.87
BDNF-204ENST00000395980 STXBP3O00186 592 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 GYG1P46976 350 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 SLC7A5Q01650 507 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 PLCB4Q15147 1175 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 FAM47AQ5JRC9 791 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 HMGB1P1B2RPK0 211 aaPredicted RBP9.62□□□□□ -0.87
BDNF-204ENST00000395980 FNTAP49354 379 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 GSCP56915 257 aaPredicted RBP9.62□□□□□ -0.87
BDNF-204ENST00000395980 PDCLQ13371 301 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 TXNRD1Q16881 649 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 KCNV1Q6PIU1 500 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 UNC13DQ70J99 1090 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 C3orf20Q8ND61 904 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 PNMA1Q8ND90 353 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 TACO1Q9BSH4 297 aaKnown RBP9.62□□□□□ -0.87
BDNF-204ENST00000395980 LRRC53A6NM62 1247 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 CES2O00748 559 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 FCER1AP12319 257 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 LSP1P33241 339 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 DDR1Q08345 913 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 DRP2Q13474 957 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 OTUD6BQ8N6M0 293 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 CALML4Q96GE6 196 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 ROBO3Q96MS0 1386 aa9.62□□□□□ -0.87
BDNF-204ENST00000395980 CAMTA2O94983 1202 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 NAP1L1P55209 391 aaKnown RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 LRIG3Q6UXM1 1119 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 PROM2Q8N271 834 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 CABS1Q96KC9 395 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 CCDC43Q96MW1 224 aaKnown RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 ZMYND12Q9H0C1 365 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 MAD2L2Q9UI95 211 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 ZNF233A6NK53 670 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 EPHB6O15197 1021 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 PPP1R37O75864 691 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 NR1D1P20393 614 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 MATR3P43243 847 aaKnown RBP eCLIP9.61□□□□□ -0.87
BDNF-204ENST00000395980 SETQ01105 290 aaPredicted RBP9.61□□□□□ -0.87
BDNF-204ENST00000395980 NONOQ15233 471 aaKnown RBP eCLIP9.61□□□□□ -0.87
BDNF-204ENST00000395980 RRAGAQ7L523 313 aa9.61□□□□□ -0.87
BDNF-204ENST00000395980 FBXO33Q7Z6M2 555 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms