RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 ALDH5A1P51649 535 aaPredicted RBP10.66□□□□□ -0.7
CDRT1-204ENST00000395906 KCNQ4P56696 695 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 ITIH3Q06033 890 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 STK38Q15208 465 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 ZNF365Q70YC5 407 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 PTF1AQ7RTS3 328 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 SAMD3Q8N6K7 520 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 PI4KAP1Q8N8J0 262 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 LINC00301Q8NCQ3 95 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 ERMNQ8TAM6 284 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 PIGBQ92521 554 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
CDRT1-204ENST00000395906 FAM192AQ9GZU8 254 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 DLGAP2Q9P1A6 1054 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 CTNNAL1Q9UBT7 734 aa10.66□□□□□ -0.7
CDRT1-204ENST00000395906 SPATA31A1Q5TZJ5 1347 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 KCNQ2O43526 872 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 WFS1O76024 890 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 YEATS4O95619 227 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 DRD4P21917 467 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 ATP11AP98196 1134 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 DDB1Q16531 1140 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 PI16Q6UXB8 463 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 SEPT14Q6ZU15 432 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 GET4Q7L5D6 327 aaPredicted RBP10.65□□□□□ -0.7
CDRT1-204ENST00000395906 MREGQ8N565 214 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 ZNF653Q96CK0 615 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 TCEANC2Q96MN5 208 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 POLR3CQ9BUI4 534 aaPredicted RBP10.65□□□□□ -0.7
CDRT1-204ENST00000395906 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 LUC7LQ9NQ29 371 aaKnown RBP10.65□□□□□ -0.7
CDRT1-204ENST00000395906 SLC12A6Q9UHW9 1150 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 USP21Q9UK80 565 aa10.65□□□□□ -0.7
CDRT1-204ENST00000395906 PDE2AO00408 941 aaPredicted RBP10.65□□□□□ -0.71
CDRT1-204ENST00000395906 KRT38O76015 456 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 PFKFB1P16118 471 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 CMA1P23946 247 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 GSTT1P30711 240 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 HPDP32754 393 aaPredicted RBP10.65□□□□□ -0.71
CDRT1-204ENST00000395906 SH3BGRP55822 239 aaPredicted RBP10.65□□□□□ -0.71
CDRT1-204ENST00000395906 USP46P62068 366 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 LACTBP83111 547 aaPredicted RBP10.65□□□□□ -0.71
CDRT1-204ENST00000395906 ARHGAP18Q8N392 663 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 NSUN7Q8NE18 718 aaKnown RBP10.65□□□□□ -0.71
CDRT1-204ENST00000395906 CPLX3Q8WVH0 158 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 PPP2R3CQ969Q6 453 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 AIDAQ96BJ3 306 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 LRRC1Q9BTT6 524 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 DMGDHQ9UI17 866 aaKnown RBP10.65□□□□□ -0.71
CDRT1-204ENST00000395906 GUCA1BQ9UMX6 200 aa10.65□□□□□ -0.71
CDRT1-204ENST00000395906 JCADQ9P266 1359 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 PNMA6EA0A0J9YXQ4 647 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 ORC4O43929 436 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 HIP1RO75146 1068 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 OXCT1P55809 520 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 ITIH4Q14624 930 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 HSP90AA4PQ58FG1 418 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 CCDC102BQ68D86 513 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 CYP26C1Q6V0L0 522 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 HOOK3Q86VS8 718 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 RAPGEF5Q92565 580 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 PRCCQ92733 491 aaPredicted RBP10.64□□□□□ -0.71
CDRT1-204ENST00000395906 MAP4K1Q92918 833 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 HAUS4Q9H6D7 363 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 TMBIM4Q9HC24 238 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 IL1RAPL2Q9NP60 686 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 TMOD3Q9NYL9 352 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 ADAM22Q9P0K1 906 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 THRAP3Q9Y2W1 955 aaKnown RBP10.64□□□□□ -0.71
CDRT1-204ENST00000395906 NFE2L3Q9Y4A8 694 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 ZMYM6O95789 1325 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 SPTLC2O15270 562 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 ACADSP16219 412 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 VAV2P52735 878 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 HDAC4P56524 1084 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 CLPPQ16740 277 aaPredicted RBP10.64□□□□□ -0.71
CDRT1-204ENST00000395906 FOXB2Q5VYV0 432 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 IRGCQ6NXR0 463 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 ZNF572Q7Z3I7 529 aaPredicted RBP10.64□□□□□ -0.71
CDRT1-204ENST00000395906 EXOC3L1Q86VI1 746 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 MARCH10Q8NA82 808 aaPredicted RBP10.64□□□□□ -0.71
CDRT1-204ENST00000395906 ENOX1Q8TC92 643 aaKnown RBP10.64□□□□□ -0.71
CDRT1-204ENST00000395906 FBF1Q8TES7 1133 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 NCSTNQ92542 709 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 AZIN2Q96A70 460 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 STIM2Q9P246 746 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 SCOCQ9UIL1 159 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 SH3GLB1Q9Y371 365 aa10.64□□□□□ -0.71
CDRT1-204ENST00000395906 LGR5O75473 907 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 BCRP11274 1271 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 GNAZP19086 355 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 GBP1P32455 592 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 KCNJ2P63252 427 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 COL9A3Q14050 684 aaPredicted RBP10.63□□□□□ -0.71
CDRT1-204ENST00000395906 USH1GQ495M9 461 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 RUFY4Q6ZNE9 571 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 SAPCD2Q86UD0 394 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 SLC15A3Q8IY34 581 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 PTPRN2Q92932 1015 aa10.63□□□□□ -0.71
CDRT1-204ENST00000395906 HINFPQ9BQA5 517 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms