RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 PANK4Q9NVE7 773 aa17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 MKRN1Q9UHC7 482 aaKnown RBP17.72■□□□□ 0.43
SMARCD1-202ENST00000394963 CYP27A1Q02318 531 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 RASSF7Q02833 373 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 NPY5RQ15761 445 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 ZNF397Q8NF99 534 aaPredicted RBP17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 CNOT6LQ96LI5 555 aaKnown RBP17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 GOPCQ9HD26 462 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 IMPACTQ9P2X3 320 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 DNM3Q9UQ16 869 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 PPP2R2CQ9Y2T4 447 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 AKAP11Q9UKA4 1901 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 GAS7O60861 476 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 CCZ1BP86790 482 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 CCZ1P86791 482 aaPredicted RBP17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 ARHGAP4P98171 946 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 MYCT1Q8N699 235 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 MRPL44Q9H9J2 332 aaKnown RBP17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 JADE2Q9NQC1 790 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 YDJCA8MPS7 323 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 DYNC1I1O14576 645 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 FAM13AO94988 1023 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 CXCL9Q07325 125 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 RAPGEF1Q13905 1077 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 ARL6IP4Q66PJ3 421 aaKnown RBP17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 GALNT17Q6IS24 598 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 EEPD1Q7L9B9 569 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 RTKN2Q8IZC4 609 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 TRIML1Q8N9V2 468 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 ZDHHC15Q96MV8 337 aa17.71■□□□□ 0.43
SMARCD1-202ENST00000394963 ENC1O14682 589 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 CCP110O43303 1012 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 KLK7P49862 253 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 PMS1P54277 932 aaKnown RBP17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 SPA17Q15506 151 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 MKRN3Q13064 507 aaKnown RBP17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 RSBN1LQ6PCB5 846 aaPredicted RBP17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 SH3GLB2Q9NR46 395 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.7■□□□□ 0.421e-8■□□□□ 10.2
SMARCD1-202ENST00000394963 ERCC5P28715 1186 aaPredicted RBP17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 CLEC11AQ9Y240 323 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 PAXBP1Q9Y5B6 917 aa17.7■□□□□ 0.42
SMARCD1-202ENST00000394963 RHOXF2BP0C7M4 288 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 GRM1Q13255 1194 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 E4F1Q66K89 784 aaPredicted RBP17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 RHOXF2Q9BQY4 288 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 PICK1Q9NRD5 415 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 ARHGAP6O43182 974 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 FAM26FQ5R3K3 315 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 DLK2Q6UY11 383 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 RRAGAQ7L523 313 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 CCDC65Q8IXS2 484 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 CCDC155Q8N6L0 562 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 GLIS3Q8NEA6 775 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 HOOK2Q96ED9 719 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 CCDC42Q96M95 316 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 SPAG5Q96R06 1193 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 PAGR1Q9BTK6 254 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 PRR12Q9ULL5 1215 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 NUP188Q5SRE5 1749 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 MYH3P11055 1940 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 GCOM1H8Y6P7 765 aaPredicted RBP17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 POLR2MP0CAP2 368 aa17.69■□□□□ 0.42
SMARCD1-202ENST00000394963 MYMKA6NI61 221 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 PPARDQ03181 441 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 MICALL2Q8IY33 904 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 TRIM9Q9C026 710 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 GAKO14976 1311 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 A0A1W2PRG0 241 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 BICDL2A1A5D9 508 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 H7C1D1 291 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 PRPF6O94906 941 aaKnown RBP17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 FXR1P51114 621 aaKnown RBP eCLIP17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 CCDC122Q5T0U0 273 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 LRCH2Q5VUJ6 765 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 CHURC1Q8WUH1 139 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 SPTLC3Q9NUV7 552 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 ABCB11O95342 1321 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 SLU7O95391 586 aaKnown RBP17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 FAM193AP78312 1265 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 EAPPQ56P03 285 aaPredicted RBP17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 SH3BP5LQ7L8J4 393 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 CNGA4Q8IV77 575 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 KSR1Q8IVT5 923 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 MTRQ99707 1265 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 ZNRF3Q9ULT6 936 aa17.68■□□□□ 0.42
SMARCD1-202ENST00000394963 ABCA3Q99758 1704 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 A0A0U1RQG5 324 aaPredicted RBP17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 BACH1O14867 736 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 PLA2G4BP0C869 781 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 CYP2J2P51589 502 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 TCP11X2Q5H9J9 407 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 P2RX5Q93086 422 aa17.67■□□□□ 0.42
SMARCD1-202ENST00000394963 PPP1R3GB7ZBB8 358 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms