RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 MRPS27Q92552 414 aaKnown RBP7.92□□□□□ -1.14
RTN4-205ENST00000394609 COA7Q96BR5 231 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 MRGPRX2Q96LB1 330 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 DEFB129Q9H1M3 183 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 TNMDQ9H2S6 317 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 JMJD4Q9H9V9 463 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 PGAP2Q9UHJ9 254 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 PCDHA4Q9UN74 947 aa7.92□□□□□ -1.14
RTN4-205ENST00000394609 BRCA1P38398 1863 aaKnown RBP7.91□□□□□ -1.14
RTN4-205ENST00000394609 A0A1W2PQ27 194 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 A0A1W2PQ64 194 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 A0A1W2PQD8 194 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 SMCO2A6NFE2 343 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 TRIM75PA6NK02 468 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 PPP6R2O75170 966 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 ZMYND10O75800 440 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 NDUFB10O96000 172 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 SMARCA1P28370 1054 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 EPS15P42566 896 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 TNNI2P48788 182 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 SNAP25P60880 206 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 GRIN1Q05586 938 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 FAM160A1Q05DH4 1040 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 TNFAIP1Q13829 316 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 GPATCH4Q5T3I0 446 aaKnown RBP7.91□□□□□ -1.14
RTN4-205ENST00000394609 LCE2AQ5TA79 106 aaPredicted RBP7.91□□□□□ -1.14
RTN4-205ENST00000394609 SHC4Q6S5L8 630 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 JMYQ8N9B5 988 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 ENGASEQ8NFI3 743 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 KIFC2Q96AC6 838 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 TEPSINQ96N21 525 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 FEZ1Q99689 392 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 TSPY26PQ9H489 355 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 CLSTN2Q9H4D0 955 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 DDX19AQ9NUU7 478 aaKnown RBP7.91□□□□□ -1.14
RTN4-205ENST00000394609 ZBTB21Q9ULJ3 1066 aa7.91□□□□□ -1.14
RTN4-205ENST00000394609 COL2A1P02458 1487 aaPredicted RBP7.91□□□□□ -1.14
RTN4-205ENST00000394609 KINO60870 393 aaKnown RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 PPP1R11O60927 126 aaPredicted RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 DDNO94850 711 aaPredicted RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 JUNDP17535 347 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 CMA1P23946 247 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 MCM7P33993 719 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 CAP2P40123 477 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 FAM193AP78312 1265 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 IKQ13123 557 aaPredicted RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 ZYXQ15942 572 aaKnown RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 MAP3K11Q16584 847 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 KIAA1755Q5JYT7 1200 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 TTC38Q5R3I4 469 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 NBPF12Q5TAG4 269 aaPredicted RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 ANGEL2Q5VTE6 544 aaKnown RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 FMR1NBQ8N0W7 255 aaPredicted RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 GPC2Q8N158 579 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 KRI1Q8N9T8 703 aaKnown RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 CCDC148Q8NFR7 591 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 DCAF4Q8WV16 495 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 ERCC4Q92889 916 aaPredicted RBP7.9□□□□□ -1.14
RTN4-205ENST00000394609 ZMYND12Q9H0C1 365 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 ATP13A2Q9NQ11 1180 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 GPRC5DQ9NZD1 345 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 RNF181Q9P0P0 153 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 PCDHA6Q9UN73 950 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 PCDHA8Q9Y5H6 950 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 SIPA1L1O43166 1804 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 ECM29Q5VYK3 1845 aa7.9□□□□□ -1.14
RTN4-205ENST00000394609 PNMA6FA0A0J9YX94 578 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 CCDC194A0A1B0GVG4 234 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 PHF20L1A8MW92 1017 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 TMEM232C9JQI7 657 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 M0R2N6 131 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 PFKFB1P16118 471 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 MMP14P50281 582 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 HIRAP54198 1017 aaPredicted RBP7.89□□□□□ -1.15
RTN4-205ENST00000394609 INF2Q27J81 1249 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 GMCL1P1Q8NEA9 526 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 SDF4Q9BRK5 362 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 GLIS2Q9BZE0 524 aaPredicted RBP7.89□□□□□ -1.15
RTN4-205ENST00000394609 ARHGEF10LQ9HCE6 1279 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 BIN2Q9UBW5 565 aaPredicted RBP7.89□□□□□ -1.15
RTN4-205ENST00000394609 FBXO2Q9UK22 296 aaPredicted RBP7.89□□□□□ -1.15
RTN4-205ENST00000394609 FZD1Q9UP38 647 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 PSME4Q14997 1843 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 ZBTB5O15062 677 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 CUTAO60888 179 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 ZNF202O95125 648 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 BMP3P12645 472 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 GNA11P29992 359 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 MAP3K10Q02779 954 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 C9orf131Q5VYM1 1079 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 JAKMIP3Q5VZ66 844 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 RESP18Q5W5W9 173 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 GALNT17Q6IS24 598 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 PDCL2Q8N4E4 241 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 CCDC12Q8WUD4 166 aaPredicted RBP7.89□□□□□ -1.15
RTN4-205ENST00000394609 GMCL1Q96IK5 515 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 C6orf50Q9HD87 102 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 TMEM260Q9NX78 707 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 GGA3Q9NZ52 723 aa7.89□□□□□ -1.15
RTN4-205ENST00000394609 CEP131Q9UPN4 1083 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms