RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 GHRHRQ02643 423 aa26.81■■□□□ 1.88
HMGA2-202ENST00000393577 FSCN1Q16658 493 aaKnown RBP26.81■■□□□ 1.88
HMGA2-202ENST00000393577 ARHGEF16Q5VV41 709 aa26.81■■□□□ 1.88
HMGA2-202ENST00000393577 CMTR1Q8N1G2 835 aaKnown RBP26.81■■□□□ 1.88
HMGA2-202ENST00000393577 SRBD1Q8N5C6 995 aaKnown RBP26.81■■□□□ 1.88
HMGA2-202ENST00000393577 KCNB2Q92953 911 aa26.81■■□□□ 1.88
HMGA2-202ENST00000393577 RRP36Q96EU6 259 aaKnown RBP26.81■■□□□ 1.88
HMGA2-202ENST00000393577 PRDM5Q9NQX1 630 aaPredicted RBP26.81■■□□□ 1.88
HMGA2-202ENST00000393577 PRKAG2Q9UGJ0 569 aa26.81■■□□□ 1.88
HMGA2-202ENST00000393577 EIF2AK2P19525 551 aaKnown RBP26.8■■□□□ 1.88
HMGA2-202ENST00000393577 SMARCA1P28370 1054 aa26.8■■□□□ 1.88
HMGA2-202ENST00000393577 HOXA13P31271 388 aaPredicted RBP26.8■■□□□ 1.88
HMGA2-202ENST00000393577 TLE2Q04725 743 aa26.8■■□□□ 1.88
HMGA2-202ENST00000393577 SYNE3Q6ZMZ3 975 aa26.8■■□□□ 1.88
HMGA2-202ENST00000393577 VTI1AQ96AJ9 217 aa26.8■■□□□ 1.88
HMGA2-202ENST00000393577 PXMP2Q9NR77 195 aa26.8■■□□□ 1.88
HMGA2-202ENST00000393577 SNX14Q9Y5W7 946 aa26.8■■□□□ 1.88
HMGA2-202ENST00000393577 LTBP2Q14767 1821 aa26.8■■□□□ 1.88
HMGA2-202ENST00000393577 PQBP1O60828 265 aaKnown RBP26.79■■□□□ 1.88
HMGA2-202ENST00000393577 HMGB1P09429 215 aaKnown RBP26.79■■□□□ 1.88
HMGA2-202ENST00000393577 MDM2Q00987 491 aaPredicted RBP26.79■■□□□ 1.88
HMGA2-202ENST00000393577 PPP2R5BQ15173 497 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 APOA5Q6Q788 366 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 SAMD3Q8N6K7 520 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 FANCBQ8NB91 859 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 SCFD2Q8WU76 684 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 JAKMIP1Q96N16 626 aaKnown RBP26.79■■□□□ 1.88
HMGA2-202ENST00000393577 IWS1Q96ST2 819 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 PDLIM7Q9NR12 457 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 MAP3K20Q9NYL2 800 aaKnown RBP26.79■■□□□ 1.88
HMGA2-202ENST00000393577 SEC63Q9UGP8 760 aaKnown RBP26.79■■□□□ 1.88
HMGA2-202ENST00000393577 ELP1O95163 1332 aa26.79■■□□□ 1.88
HMGA2-202ENST00000393577 KIAA1217Q5T5P2 1943 aa26.78■■□□□ 1.88
HMGA2-202ENST00000393577 GCOM1H8Y6P7 765 aaPredicted RBP26.78■■□□□ 1.88
HMGA2-202ENST00000393577 POLR2MP0CAP2 368 aa26.78■■□□□ 1.88
HMGA2-202ENST00000393577 CPA1P15085 419 aa26.78■■□□□ 1.88
HMGA2-202ENST00000393577 ZEB2O60315 1214 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 BMP8BP34820 402 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 STXBP2Q15833 593 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 CXCL17Q6UXB2 119 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 TMTC3Q6ZXV5 915 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 SH3RF1Q7Z6J0 888 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 OR6J1Q8NGC5 347 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 BRPF3Q9ULD4 1205 aa26.77■■□□□ 1.88
HMGA2-202ENST00000393577 A0A0U1RQG5 324 aaPredicted RBP26.76■■□□□ 1.87
HMGA2-202ENST00000393577 NKRFO15226 690 aaKnown RBP eCLIP26.76■■□□□ 1.874e-8■□□□□ 8.1
HMGA2-202ENST00000393577 ARIH2O95376 493 aa26.76■■□□□ 1.87
HMGA2-202ENST00000393577 NR3C2P08235 984 aa26.76■■□□□ 1.87
HMGA2-202ENST00000393577 TXNP10599 105 aaKnown RBP26.76■■□□□ 1.87
HMGA2-202ENST00000393577 TTLL4Q14679 1199 aa26.76■■□□□ 1.87
HMGA2-202ENST00000393577 SEPT14Q6ZU15 432 aa26.76■■□□□ 1.87
HMGA2-202ENST00000393577 CCDC82Q8N4S0 544 aa26.76■■□□□ 1.87
HMGA2-202ENST00000393577 COPS5Q92905 334 aa26.76■■□□□ 1.87
HMGA2-202ENST00000393577 LBHD1Q9BQE6 289 aaPredicted RBP26.76■■□□□ 1.87
HMGA2-202ENST00000393577 UBE2OQ9C0C9 1292 aaKnown RBP26.76■■□□□ 1.87
HMGA2-202ENST00000393577 ZBTB43O43298 467 aa26.75■■□□□ 1.87
HMGA2-202ENST00000393577 CLTBP09497 229 aa26.75■■□□□ 1.87
HMGA2-202ENST00000393577 FXR1P51114 621 aaKnown RBP eCLIP26.75■■□□□ 1.87
HMGA2-202ENST00000393577 FGD1P98174 961 aa26.75■■□□□ 1.87
HMGA2-202ENST00000393577 BLOC1S2Q6QNY1 142 aa26.75■■□□□ 1.87
HMGA2-202ENST00000393577 ANKRD33Q7Z3H0 272 aa26.75■■□□□ 1.87
HMGA2-202ENST00000393577 FCHSD1Q86WN1 690 aa26.75■■□□□ 1.87
HMGA2-202ENST00000393577 PDCD2LQ9BRP1 358 aa26.75■■□□□ 1.87
HMGA2-202ENST00000393577 KLF18A0A0U1RQI7 1052 aa26.74■■□□□ 1.87
HMGA2-202ENST00000393577 A0A1W2PPC1 479 aa26.74■■□□□ 1.87
HMGA2-202ENST00000393577 hCG_1642624A0A1W2PR95 340 aa26.74■■□□□ 1.87
HMGA2-202ENST00000393577 TRIM43BA6NCK2 446 aa26.74■■□□□ 1.87
HMGA2-202ENST00000393577 CABYRO75952 493 aa26.74■■□□□ 1.87
HMGA2-202ENST00000393577 TRIM43Q96BQ3 446 aaPredicted RBP26.74■■□□□ 1.87
HMGA2-202ENST00000393577 RBM28Q9NW13 759 aaKnown RBP26.74■■□□□ 1.87
HMGA2-202ENST00000393577 DCDC2CA8MYV0 355 aa26.73■■□□□ 1.87
HMGA2-202ENST00000393577 ARVCFO00192 962 aa26.73■■□□□ 1.87
HMGA2-202ENST00000393577 MYCLP12524 364 aaPredicted RBP26.73■■□□□ 1.87
HMGA2-202ENST00000393577 CPT1AP50416 773 aa26.73■■□□□ 1.87
HMGA2-202ENST00000393577 RTN1Q16799 776 aa26.73■■□□□ 1.87
HMGA2-202ENST00000393577 Q6ZUG5 572 aa26.73■■□□□ 1.87
HMGA2-202ENST00000393577 TOX2Q96NM4 488 aa26.73■■□□□ 1.87
HMGA2-202ENST00000393577 NAP1L2Q9ULW6 460 aaPredicted RBP26.73■■□□□ 1.87
HMGA2-202ENST00000393577 MROH7Q68CQ1 1323 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 GOLGA8AA7E2F4 631 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 GOLGA8BA8MQT2 603 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 EPB41L2O43491 1005 aaKnown RBP26.72■■□□□ 1.87
HMGA2-202ENST00000393577 EIF3JO75822 258 aaKnown RBP26.72■■□□□ 1.87
HMGA2-202ENST00000393577 CDK7P50613 346 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 FAAP100Q0VG06 881 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 PGM5Q15124 567 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 CCDC62Q6P9F0 684 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 IL31RAQ8NI17 732 aa26.72■■□□□ 1.87
HMGA2-202ENST00000393577 CNTNAP5Q8WYK1 1306 aa26.71■■□□□ 1.87
HMGA2-202ENST00000393577 LY6KQ17RY6 165 aa26.71■■□□□ 1.87
HMGA2-202ENST00000393577 TMEM39AQ9NV64 488 aa26.71■■□□□ 1.87
HMGA2-202ENST00000393577 SLC34A2O95436 690 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 MYL3P08590 195 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 CASTP20810 708 aaKnown RBP26.7■■□□□ 1.86
HMGA2-202ENST00000393577 RPS6KB1P23443 525 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 PSMA5P28066 241 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 PSMC6P62333 389 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 APOBRQ0VD83 1088 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 ITGA7Q13683 1181 aa26.7■■□□□ 1.86
HMGA2-202ENST00000393577 BRDTQ58F21 947 aaPredicted RBP26.7■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms