RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 CTAGE6Q86UF2 777 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 CLEC10AQ8IUN9 316 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 CTAGE4Q8IX94 777 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 HPS3Q969F9 1004 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 EEF2KMTQ96G04 330 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 FUT8Q9BYC5 575 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 JMJD4Q9H9V9 463 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 RIC8AQ9NPQ8 531 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 AGPAT5Q9NUQ2 364 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 TRIM10Q9UDY6 481 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 GREB1LQ9C091 1923 aaPredicted RBP13.73□□□□□ -0.21
RFC5-201ENST00000392542 A0A1W2PQJ5 194 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
RFC5-201ENST00000392542 LONRF2Q1L5Z9 754 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 SLC27A3Q5K4L6 730 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 FKBP15Q5T1M5 1219 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 CERS5Q8N5B7 392 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 HNRNPLLQ8WVV9 542 aaKnown RBP13.73□□□□□ -0.21
RFC5-201ENST00000392542 RAD54LQ92698 747 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 IQCDQ96DY2 449 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 PCMTD1Q96MG8 357 aaPredicted RBP13.73□□□□□ -0.21
RFC5-201ENST00000392542 SERPINB13Q9UIV8 391 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
RFC5-201ENST00000392542 MYH4Q9Y623 1939 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 POTEMA6NI47 508 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 TFRCP02786 760 aaKnown RBP13.72□□□□□ -0.21
RFC5-201ENST00000392542 HOXA7P31268 230 aaPredicted RBP13.72□□□□□ -0.21
RFC5-201ENST00000392542 TNNI2P48788 182 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 PPP4R3AQ6IN85 833 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 CCDC170Q8IYT3 715 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 ADGRF4Q8IZF3 695 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 SNX29Q8TEQ0 813 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 USP40Q9NVE5 1235 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 ATP6V0A2Q9Y487 856 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 EIF3CLB5ME19 914 aaKnown RBP13.72□□□□□ -0.21
RFC5-201ENST00000392542 SHMT1P34896 483 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 CLK2P49760 499 aaKnown RBP13.72□□□□□ -0.21
RFC5-201ENST00000392542 CDK17Q00537 523 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 TMEM119Q4V9L6 283 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 CCDC122Q5T0U0 273 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 KRT79Q5XKE5 535 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 TRAPPC11Q7Z392 1133 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 KIAA1328Q86T90 577 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 GUF1Q8N442 669 aaKnown RBP13.72□□□□□ -0.21
RFC5-201ENST00000392542 PNKPQ96T60 521 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 EIF3CQ99613 913 aaKnown RBP13.72□□□□□ -0.21
RFC5-201ENST00000392542 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
RFC5-201ENST00000392542 NHEJ1Q9H9Q4 299 aaPredicted RBP13.72□□□□□ -0.21
RFC5-201ENST00000392542 ADAMTSL1Q8N6G6 1762 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 PPP1R11O60927 126 aaPredicted RBP13.71□□□□□ -0.21
RFC5-201ENST00000392542 UBE2SQ16763 222 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 MEX3CQ5U5Q3 659 aaKnown RBP13.71□□□□□ -0.21
RFC5-201ENST00000392542 DYMQ7RTS9 669 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 EHBP1Q8NDI1 1231 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 JAKMIP2Q96AA8 810 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 NUDT12Q9BQG2 462 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 ABCB11O95342 1321 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 MYH7BA7E2Y1 1941 aa13.71□□□□□ -0.21
RFC5-201ENST00000392542 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.22
RFC5-201ENST00000392542 KRT86O43790 486 aa13.71□□□□□ -0.22
RFC5-201ENST00000392542 FGFR1OPO95684 399 aaKnown RBP13.71□□□□□ -0.22
RFC5-201ENST00000392542 SMC1AQ14683 1233 aaKnown RBP13.71□□□□□ -0.22
RFC5-201ENST00000392542 VWA3BQ502W6 1294 aa13.71□□□□□ -0.22
RFC5-201ENST00000392542 GPATCH4Q5T3I0 446 aaKnown RBP13.71□□□□□ -0.22
RFC5-201ENST00000392542 TTBK2Q6IQ55 1244 aa13.71□□□□□ -0.22
RFC5-201ENST00000392542 CUL5Q93034 780 aa13.71□□□□□ -0.22
RFC5-201ENST00000392542 ZC3H12CQ9C0D7 883 aaKnown RBP13.71□□□□□ -0.22
RFC5-201ENST00000392542 AFF2P51816 1311 aa13.71□□□□□ -0.22
RFC5-201ENST00000392542 MAP2K7O14733 419 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 ERLIN1O75477 346 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 IPO7O95373 1038 aaKnown RBP13.7□□□□□ -0.22
RFC5-201ENST00000392542 OAS2P29728 719 aaKnown RBP13.7□□□□□ -0.22
RFC5-201ENST00000392542 PSMD2Q13200 908 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 BEND6Q5SZJ8 279 aaPredicted RBP13.7□□□□□ -0.22
RFC5-201ENST00000392542 MTMR8Q96EF0 704 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 TFR2Q9UP52 801 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 ARFGEF1Q9Y6D6 1849 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 ZBTB5O15062 677 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 HLA-DOAP06340 250 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 MRPL12P52815 198 aaKnown RBP13.7□□□□□ -0.22
RFC5-201ENST00000392542 LRRC63Q05C16 580 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 EHHADHQ08426 723 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 MAN2A1Q16706 1144 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 CCDC96Q2M329 555 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 PAPD7Q5XG87 772 aaKnown RBP13.7□□□□□ -0.22
RFC5-201ENST00000392542 NCAPH2Q6IBW4 605 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 CDC42EP5Q6NZY7 148 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 KCNK18Q7Z418 384 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 DDX12PQ92771 950 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 DDX25Q9UHL0 483 aaKnown RBP13.7□□□□□ -0.22
RFC5-201ENST00000392542 SIK3Q9Y2K2 1263 aa13.7□□□□□ -0.22
RFC5-201ENST00000392542 TUBBP07437 444 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 RHOXF2BP0C7M4 288 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 IDEP14735 1019 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 GCFC2P16383 781 aaKnown RBP13.69□□□□□ -0.22
RFC5-201ENST00000392542 HNRNPH3P31942 346 aaKnown RBP13.69□□□□□ -0.22
RFC5-201ENST00000392542 FOXR2Q6PJQ5 311 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 HHIPL2Q6UWX4 724 aa13.69□□□□□ -0.22
RFC5-201ENST00000392542 HAS1Q92839 578 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms