RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GULP1Q9UBP9 304 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 TCAF1Q9Y4C2 921 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 IVNS1ABPQ9Y6Y0 642 aa3.08□□□□□ -1.92
RNU6-239P-201ENST00000390990 MEIS3P2A8K0S8 358 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZNF623O75123 536 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 NTRK1P04629 796 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZNF28P17035 718 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 PPP2CBP62714 309 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 PPP2CAP67775 309 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 FOXE3Q13461 319 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 SEZ6Q53EL9 994 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 WWC2Q6AWC2 1192 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 ETV3LQ6ZN32 361 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 PLEKHH3Q7Z736 793 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 PPFIBP1Q86W92 1011 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 DHRS1Q96LJ7 313 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZDHHC15Q96MV8 337 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 CEP89Q96ST8 783 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 PCDH18Q9HCL0 1135 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 FHOD1Q9Y613 1164 aa3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 WDR33Q9C0J8 1336 aaKnown RBP3.07□□□□□ -1.92
RNU6-239P-201ENST00000390990 CD247P20963 164 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 EIF4A3P38919 411 aaKnown RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 PMS1P54277 932 aaKnown RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 NANOS3P60323 173 aaKnown RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 POU4F1Q01851 419 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 LRRFIP1Q32MZ4 808 aaKnown RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 RCSD1Q6JBY9 416 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 PKN3Q6P5Z2 889 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 ARHGEF18Q6ZSZ5 1173 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 ERMP1Q7Z2K6 904 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 TMC4Q7Z404 712 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 CPNE8Q86YQ8 564 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 MIB1Q86YT6 1006 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 REXO1Q8N1G1 1221 aaKnown RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 USP33Q8TEY7 942 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZNF296Q8WUU4 475 aaPredicted RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 PCSK5Q92824 1860 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 NOL6Q9H6R4 1146 aaKnown RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 JADE2Q9NQC1 790 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 UBP1Q9NZI7 540 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZNF451Q9Y4E5 1061 aa3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 SUPT16HQ9Y5B9 1047 aaKnown RBP3.06□□□□□ -1.92
RNU6-239P-201ENST00000390990 SGSM2O43147 1006 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 NARSO43776 548 aaKnown RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 B4GALT4O60513 344 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 TP53P04637 393 aaPredicted RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 CYP1A1P04798 512 aaPredicted RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 MCM4P33991 863 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 IL13P35225 146 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 STAT5AP42229 794 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 MLLT6P55198 1093 aaPredicted RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 PURAQ00577 322 aaKnown RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 DPTQ07507 201 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 ADAM9Q13443 819 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 MIIPQ5JXC2 388 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 PRAMEF18Q5VWM3 479 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 EEF1DP3Q658K8 133 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 SLFN13Q68D06 897 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 INTS3Q68E01 1043 aaKnown RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 KBTBD2Q8IY47 623 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZNF503Q96F45 646 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 YTHDC1Q96MU7 727 aaKnown RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 MEGF9Q9H1U4 602 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 SEMA4AQ9H3S1 761 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 FAM86C1Q9NVL1 165 aa3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 SF3B6Q9Y3B4 125 aaKnown RBP3.05□□□□□ -1.92
RNU6-239P-201ENST00000390990 ANKRD33BA6NCL7 494 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 STXBP3O00186 592 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 AURKAO14965 403 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 PLSCR1O15162 318 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZNF202O95125 648 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 FUCA1P04066 466 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 XPCQ01831 940 aaPredicted RBP3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 ABHD18Q0P651 414 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 PPP2R5DQ14738 602 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 CR1LQ2VPA4 569 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 RNF207Q6ZRF8 634 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 PLEKHO2Q8TD55 490 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 TRIM8Q9BZR9 551 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 TMEM168Q9H0V1 697 aa3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.04□□□□□ -1.92
RNU6-239P-201ENST00000390990 VAMP4O75379 141 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ITGA4P13612 1032 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZNF165P49910 485 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 DGCR2P98153 550 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZYXQ15942 572 aaKnown RBP3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 NRN1LQ496H8 165 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZC3H18Q86VM9 953 aaKnown RBP3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 AMER2Q8N7J2 671 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZCCHC14Q8WYQ9 949 aaKnown RBP3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 SMARCC1Q92922 1105 aaPredicted RBP3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZSWIM3Q96MP5 696 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 GNRHR2Q96P88 292 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ARID3AQ99856 593 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 L2HGDHQ9H9P8 463 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 DLL4Q9NR61 685 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ADAMTS1Q9UHI8 967 aa3.03□□□□□ -1.92
RNU6-239P-201ENST00000390990 ZFR2Q9UPR6 939 aaKnown RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms