RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ADD3Q9UEY8 706 aaKnown RBP20.42■□□□□ 0.86
ACTN4-202ENST00000390009 PCDHA12Q9UN75 941 aa20.42■□□□□ 0.86
ACTN4-202ENST00000390009 TAL1P17542 331 aaPredicted RBP20.41■□□□□ 0.86
ACTN4-202ENST00000390009 MMP14P50281 582 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 STIM1Q13586 685 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 SV2BQ7L1I2 683 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 CCAR2Q8N163 923 aaKnown RBP20.41■□□□□ 0.86
ACTN4-202ENST00000390009 CCDC112Q8NEF3 446 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 CRYGNQ8WXF5 182 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 NUDT12Q9BQG2 462 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 CYP3A7-CYP3A51PA0A087WV96 503 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 TEX33O43247 280 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 CYP3A7P24462 503 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 GOLGA8FQ08AF8 430 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 GOLGA8DPQ0D2H9 430 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 MOXD1Q6UVY6 613 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 LARP4BQ92615 738 aaKnown RBP20.41■□□□□ 0.86
ACTN4-202ENST00000390009 EXOC1Q9NV70 894 aa20.41■□□□□ 0.86
ACTN4-202ENST00000390009 UQCRHLA0A096LP55 91 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 OPLAHO14841 1288 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 UQCRHP07919 91 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 KCNJ6P48051 423 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 ARHGAP4P98171 946 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 MAP3K10Q02779 954 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 PDE4DQ08499 809 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 MBOAT7Q96N66 472 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 TMX1Q9H3N1 280 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 VCPKMTQ9H867 229 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 KCNMB3Q9NPA1 279 aa20.4■□□□□ 0.86
ACTN4-202ENST00000390009 TRIM49BA6NDI0 452 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 SPDYE3A6NKU9 549 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 PSMA7O14818 248 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 FOSP01100 380 aaPredicted RBP20.39■□□□□ 0.86
ACTN4-202ENST00000390009 TNNT1P13805 278 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 SPAG1Q07617 926 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 MCM6Q14566 821 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 FILIP1LQ4L180 1135 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 TMEM119Q4V9L6 283 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 TRMT1Q9NXH9 659 aaKnown RBP20.39■□□□□ 0.86
ACTN4-202ENST00000390009 LIMA1Q9UHB6 759 aaKnown RBP20.39■□□□□ 0.86
ACTN4-202ENST00000390009 SCAF8Q9UPN6 1271 aaKnown RBP20.39■□□□□ 0.86
ACTN4-202ENST00000390009 BCS1LQ9Y276 419 aa20.39■□□□□ 0.86
ACTN4-202ENST00000390009 H7C1D1 291 aa20.39■□□□□ 0.85
ACTN4-202ENST00000390009 ZNF280AP59817 542 aaPredicted RBP20.39■□□□□ 0.85
ACTN4-202ENST00000390009 RASA3Q14644 834 aa20.39■□□□□ 0.85
ACTN4-202ENST00000390009 KRT31Q15323 416 aa20.39■□□□□ 0.85
ACTN4-202ENST00000390009 ZYXQ15942 572 aaKnown RBP20.39■□□□□ 0.85
ACTN4-202ENST00000390009 E4F1Q66K89 784 aaPredicted RBP20.39■□□□□ 0.85
ACTN4-202ENST00000390009 RAD54LQ92698 747 aa20.39■□□□□ 0.85
ACTN4-202ENST00000390009 SH2D4AQ9H788 454 aa20.39■□□□□ 0.85
ACTN4-202ENST00000390009 LRRC10BA6NIK2 292 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 EGFRP00533 1210 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 ASNSP08243 561 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 PMS1P54277 932 aaKnown RBP20.38■□□□□ 0.85
ACTN4-202ENST00000390009 MYMKA6NI61 221 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 RPS12P25398 132 aaKnown RBP20.38■□□□□ 0.85
ACTN4-202ENST00000390009 SREBF1P36956 1147 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 PBX1P40424 430 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 STK4Q13043 487 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 TCP11X2Q5H9J9 407 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 KCNK18Q7Z418 384 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 TC2NQ8N9U0 490 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 CHURC1Q8WUH1 139 aa20.38■□□□□ 0.85
ACTN4-202ENST00000390009 GLIS2Q9BZE0 524 aaPredicted RBP20.38■□□□□ 0.85
ACTN4-202ENST00000390009 KCNJ18B7U540 433 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 HOXA13P31271 388 aaPredicted RBP20.37■□□□□ 0.85
ACTN4-202ENST00000390009 CCT6AP40227 531 aaKnown RBP20.37■□□□□ 0.85
ACTN4-202ENST00000390009 TRAF1Q13077 416 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 KCNJ12Q14500 433 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 ECM1Q16610 540 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 NYAP1Q6ZVC0 841 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 SLFN12Q8IYM2 578 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 ANKRD20A12PQ8NF67 263 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 MYRIPQ8NFW9 859 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 KIFC2Q96AC6 838 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 DHTKD1Q96HY7 919 aaPredicted RBP20.37■□□□□ 0.85
ACTN4-202ENST00000390009 UIMC1Q96RL1 719 aa20.37■□□□□ 0.85
ACTN4-202ENST00000390009 GTPBP4Q9BZE4 634 aaKnown RBP20.37■□□□□ 0.85
ACTN4-202ENST00000390009 PSDA5PKW4 1024 aaPredicted RBP20.36■□□□□ 0.85
ACTN4-202ENST00000390009 PIK3CDO00329 1044 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 FCER1AP12319 257 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 TNFAIP1Q13829 316 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 R3HDM1Q15032 1099 aaKnown RBP20.36■□□□□ 0.85
ACTN4-202ENST00000390009 PRR16Q569H4 304 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 CNNM4Q6P4Q7 775 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 TMEM139Q8IV31 216 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 RANBP17Q9H2T7 1088 aaKnown RBP20.36■□□□□ 0.85
ACTN4-202ENST00000390009 CD2APQ9Y5K6 639 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 ADKP55263 362 aaKnown RBP20.36■□□□□ 0.85
ACTN4-202ENST00000390009 PTPN14Q15678 1187 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 Q4G0T1 1027 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 HYIQ5T013 277 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 CCDC174Q6PII3 467 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 CCDC84Q86UT8 332 aaPredicted RBP20.36■□□□□ 0.85
ACTN4-202ENST00000390009 KDM3AQ9Y4C1 1321 aa20.36■□□□□ 0.85
ACTN4-202ENST00000390009 PHF20L1A8MW92 1017 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 N4BP3O15049 544 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 PLA2G6O60733 806 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 PPP1R2P41236 205 aa20.35■□□□□ 0.85
ACTN4-202ENST00000390009 COPB1P53618 953 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms