RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 C3orf20Q8ND61 904 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 SPDL1Q96EA4 605 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 NOC4LQ9BVI4 516 aaKnown RBP16.56■□□□□ 0.24
CTNS-202ENST00000381870 ARMT1Q9H993 441 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 PLCB1Q9NQ66 1216 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 PLAGL2Q9UPG8 496 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 SLC4A4Q9Y6R1 1079 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 TJP1Q07157 1748 aa16.56■□□□□ 0.24
CTNS-202ENST00000381870 H0YGN5 161 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 RAD51CO43502 376 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 MBD4O95243 580 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 PHKG2P15735 406 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 PPP1R7Q15435 360 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 ALX1Q15699 326 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 NPY5RQ15761 445 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 UAP1Q16222 522 aaPredicted RBP16.55■□□□□ 0.24
CTNS-202ENST00000381870 ODF2Q5BJF6 829 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 RCSD1Q6JBY9 416 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 ARMC2Q8NEN0 867 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 LPIN2Q92539 896 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 CUL5Q93034 780 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 TATDN2Q93075 761 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 NFS1Q9Y697 457 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 A0A1W2PQJ5 194 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 DCDC2CA8MYV0 355 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 KLRC4O43908 158 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 CLSTN1O94985 981 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 TATP17735 454 aaPredicted RBP16.55■□□□□ 0.24
CTNS-202ENST00000381870 CDC25CP30307 473 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 PDE6BP35913 854 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 PEX19P40855 299 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 ZNF844Q08AG5 666 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 SF3A3Q12874 501 aaKnown RBP eCLIP16.55■□□□□ 0.24
CTNS-202ENST00000381870 CHADLQ6NUI6 762 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 LMBR1Q8WVP7 490 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 HOOK2Q96ED9 719 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 PLIN2Q99541 437 aa16.55■□□□□ 0.24
CTNS-202ENST00000381870 FAM207AQ9NSI2 230 aaPredicted RBP16.55■□□□□ 0.24
CTNS-202ENST00000381870 AKAP11Q9UKA4 1901 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 ADAMTS3O15072 1205 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 PLEKHA8P1O95397 391 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 LCA5LO95447 670 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 MAP2K1Q02750 393 aaPredicted RBP16.54■□□□□ 0.24
CTNS-202ENST00000381870 GFPT1Q06210 699 aaPredicted RBP16.54■□□□□ 0.24
CTNS-202ENST00000381870 HLTFQ14527 1009 aaKnown RBP eCLIP16.54■□□□□ 0.24
CTNS-202ENST00000381870 GKAP1Q5VSY0 366 aaPredicted RBP16.54■□□□□ 0.24
CTNS-202ENST00000381870 PIK3AP1Q6ZUJ8 805 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 L3MBTL1Q9Y468 752 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 PPIP5K2O43314 1243 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 FTCDO95954 541 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 METTL24Q5JXM2 366 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 ANKRD40Q6AI12 368 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 CPLX4Q7Z7G2 160 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 KLHL7Q8IXQ5 586 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 NOX5Q96PH1 765 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 EBF2Q9HAK2 575 aa16.54■□□□□ 0.24
CTNS-202ENST00000381870 PACSIN2Q9UNF0 486 aaPredicted RBP16.54■□□□□ 0.24
CTNS-202ENST00000381870 MYH6P13533 1939 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 GSG1L2A8MUP6 293 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 HNRNPH3P31942 346 aaKnown RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 CTNNA1P35221 906 aaKnown RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 SLC1A4P43007 532 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 PPP2R2AP63151 447 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 NAALADL2Q58DX5 795 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 LRIG3Q6UXM1 1119 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 PROCA1Q8NCQ7 364 aaPredicted RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 TCP11Q8WWU5 503 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 ERGIC2Q96RQ1 377 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 ORAI2Q96SN7 254 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 PYM1Q9BRP8 204 aaKnown RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 KDM4CQ9H3R0 1056 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.53■□□□□ 0.241e-7■■■□□ 14.9
CTNS-202ENST00000381870 NOVA2Q9UNW9 492 aaKnown RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 F8W031 263 aaPredicted RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 DRD4P21917 467 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 ECHS1P30084 290 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 ERVK-9P63128 1117 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 FUT2Q10981 343 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 ESCO1Q5FWF5 840 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 FIGNQ5HY92 759 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 BZW1Q7L1Q6 419 aaKnown RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 DDX42Q86XP3 938 aaKnown RBP eCLIP16.53■□□□□ 0.24
CTNS-202ENST00000381870 CCDC155Q8N6L0 562 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 GIMAP8Q8ND71 665 aaPredicted RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 NOC3LQ8WTT2 800 aaKnown RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 TAF1DQ9H5J8 278 aaPredicted RBP16.53■□□□□ 0.24
CTNS-202ENST00000381870 SLC39A2Q9NP94 309 aa16.53■□□□□ 0.24
CTNS-202ENST00000381870 LRRC53A6NM62 1247 aa16.52■□□□□ 0.24
CTNS-202ENST00000381870 PP2D1A8MPX8 630 aa16.52■□□□□ 0.24
CTNS-202ENST00000381870 ANP32DO95626 131 aa16.52■□□□□ 0.24
CTNS-202ENST00000381870 RAPGEF4Q8WZA2 1011 aa16.52■□□□□ 0.24
CTNS-202ENST00000381870 LRRC4CQ9HCJ2 640 aa16.52■□□□□ 0.24
CTNS-202ENST00000381870 RBM28Q9NW13 759 aaKnown RBP16.52■□□□□ 0.24
CTNS-202ENST00000381870 PJA2O43164 708 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 PALMO75781 387 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 CLTAP09496 248 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 GHRP10912 638 aa16.52■□□□□ 0.23
CTNS-202ENST00000381870 PHKA1P46020 1223 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms