RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 PAG1Q9NWQ8 432 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 PA2G4Q9UQ80 394 aaKnown RBP8.25□□□□□ -1.09
CDKL5-201ENST00000379989 GMEB1Q9Y692 573 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 MYH13Q9UKX3 1938 aa8.25□□□□□ -1.09
CDKL5-201ENST00000379989 ZNF233A6NK53 670 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 ITGB3BPQ13352 177 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 PPP4R3AQ6IN85 833 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 BLOC1S2Q6QNY1 142 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 SAPCD2Q86UD0 394 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 IFT43Q96FT9 208 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 NAA15Q9BXJ9 866 aaKnown RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 BRD8Q9H0E9 1235 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 SLC12A4Q9UP95 1085 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 RBM8AQ9Y5S9 174 aaKnown RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 DOCK2Q92608 1830 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 A0A1W2PQ27 194 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 A0A1W2PQ64 194 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 A0A1W2PQD8 194 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 RNF113AO15541 343 aaKnown RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 TRAPPC3O43617 180 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 TAF5LO75529 589 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 NMIQ13287 307 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 FOXB2Q5VYV0 432 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC80Q76M96 950 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 HDAC7Q8WUI4 952 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 PRCCQ92733 491 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 RPGRIP1Q96KN7 1286 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 NYXQ9GZU5 481 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 RHBDL2Q9NX52 303 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 LY75O60449 1722 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 PALM3A6NDB9 673 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 BACH1O14867 736 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 NPM3O75607 178 aaKnown RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 VCAM1P19320 739 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 RPS6KB1P23443 525 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 SP100P23497 879 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 CBX3Q13185 183 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 EZH2Q15910 746 aaKnown RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 PKN1Q16512 942 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 RNF168Q8IYW5 571 aaPredicted RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 AGXT2Q9BYV1 514 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 UTP6Q9NYH9 597 aaKnown RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 DMGDHQ9UI17 866 aaKnown RBP8.24□□□□□ -1.09
CDKL5-201ENST00000379989 LNPEPQ9UIQ6 1025 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 TMCO1Q9UM00 188 aa8.24□□□□□ -1.09
CDKL5-201ENST00000379989 PDE2AO00408 941 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 SLC27A2O14975 620 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 SEMA3EO15041 775 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 ATP1A1P05023 1023 aaKnown RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 FAM200BP0CF97 657 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 FOSBP53539 338 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 C2orf54Q08AI8 447 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 GLE1Q53GS7 698 aaKnown RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC102BQ68D86 513 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 OLFML1Q6UWY5 402 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 SLF2Q8IX21 1173 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 SMCR8Q8TEV9 937 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 RPS6KC1Q96S38 1066 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 DMAP1Q9NPF5 467 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 TUBE1Q9UJT0 475 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 ASAP1Q9ULH1 1129 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 PDHA1P08559 390 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 IFIT1P09914 478 aaKnown RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 ATP2A2P16615 1042 aaKnown RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 EPHB4P54760 987 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 UBE3CQ15386 1083 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 ALX1Q15699 326 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC152Q4G0S7 254 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 MLKLQ8NB16 471 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 LPIN2Q92539 896 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 FGD4Q96M96 766 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 SEC62Q99442 399 aaKnown RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 SAR1BQ9Y6B6 198 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 GNAT2P19087 354 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 RFC5P40937 340 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 RCAN1P53805 252 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 PPARDQ03181 441 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 ADCY1Q08828 1119 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 RBL2Q08999 1139 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 TMED1Q13445 227 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 SLC10A5Q5PT55 438 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 BICDL1Q6ZP65 573 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 IQCKQ8N0W5 287 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 TTLL11Q8NHH1 800 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 ATP6V1G3Q96LB4 118 aa8.23□□□□□ -1.09
CDKL5-201ENST00000379989 CCDC8Q9H0W5 538 aaPredicted RBP8.23□□□□□ -1.09
CDKL5-201ENST00000379989 KIAA1551Q9HCM1 1747 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 CFAP73A6NFT4 308 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 CCT8L1PA6NM43 557 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ATP5J2-PTCD1G3V325 749 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 TRIM37O94972 964 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 GSTA1P08263 222 aa8.22□□□□□ -1.09
CDKL5-201ENST00000379989 PCP11498 1178 aaKnown RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ALOX15P16050 662 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 ALDH5A1P51649 535 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 PLOD1Q02809 727 aaPredicted RBP8.22□□□□□ -1.09
CDKL5-201ENST00000379989 PUM3Q15397 648 aaKnown RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms