RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 HMGB1P09429 215 aaKnown RBP19.73■□□□□ 0.75
RER1-202ENST00000378512 BEX3Q00994 111 aa19.73■□□□□ 0.75
RER1-202ENST00000378512 TRAF1Q13077 416 aa19.73■□□□□ 0.75
RER1-202ENST00000378512 IQSEC1Q6DN90 963 aa19.73■□□□□ 0.75
RER1-202ENST00000378512 FBXL16Q8N461 479 aa19.73■□□□□ 0.75
RER1-202ENST00000378512 CTCFLQ8NI51 663 aaPredicted RBP19.73■□□□□ 0.75
RER1-202ENST00000378512 SYTL5Q8TDW5 730 aaPredicted RBP19.73■□□□□ 0.75
RER1-202ENST00000378512 NUP133Q8WUM0 1156 aa19.73■□□□□ 0.75
RER1-202ENST00000378512 LZTS2Q9BRK4 669 aa19.73■□□□□ 0.75
RER1-202ENST00000378512 PDGFCQ9NRA1 345 aa19.73■□□□□ 0.75
RER1-202ENST00000378512 KIAA0355O15063 1070 aa19.72■□□□□ 0.75
RER1-202ENST00000378512 ASGR1P07306 291 aa19.72■□□□□ 0.75
RER1-202ENST00000378512 GNAQP50148 359 aa19.72■□□□□ 0.75
RER1-202ENST00000378512 EEPD1Q7L9B9 569 aa19.72■□□□□ 0.75
RER1-202ENST00000378512 Q9Y3F1 56 aa19.72■□□□□ 0.75
RER1-202ENST00000378512 PCDHA1Q9Y5I3 950 aa19.72■□□□□ 0.75
RER1-202ENST00000378512 SLC12A7Q9Y666 1083 aa19.72■□□□□ 0.75
RER1-202ENST00000378512 MOXD2PA6NHM9 499 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 TNFAIP2Q03169 654 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 APOA5Q6Q788 366 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 NFXL1Q6ZNB6 911 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 ANKRD33Q7Z3H0 272 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 FBXO16Q8IX29 292 aaPredicted RBP19.71■□□□□ 0.75
RER1-202ENST00000378512 SRBD1Q8N5C6 995 aaKnown RBP19.71■□□□□ 0.75
RER1-202ENST00000378512 FANCBQ8NB91 859 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 GUCD1Q96NT3 240 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 AGXT2Q9BYV1 514 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 TMEM39AQ9NV64 488 aa19.71■□□□□ 0.75
RER1-202ENST00000378512 PLEKHA8P1O95397 391 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 SMPD1P17405 629 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 RCAN1P53805 252 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 GNASQ5JWF2 1037 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 HOMER1Q86YM7 354 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 SLC17A8Q8NDX2 589 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 TAAR1Q96RJ0 339 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 USP26Q9BXU7 913 aa19.7■□□□□ 0.74
RER1-202ENST00000378512 RAG1P15918 1043 aa19.69■□□□□ 0.74
RER1-202ENST00000378512 DUSP28Q4G0W2 176 aa19.69■□□□□ 0.74
RER1-202ENST00000378512 TMTC3Q6ZXV5 915 aa19.69■□□□□ 0.74
RER1-202ENST00000378512 TCEANC2Q96MN5 208 aa19.69■□□□□ 0.74
RER1-202ENST00000378512 IWS1Q96ST2 819 aa19.69■□□□□ 0.74
RER1-202ENST00000378512 MPHOSPH6Q99547 160 aaKnown RBP19.69■□□□□ 0.74
RER1-202ENST00000378512 BRPF3Q9ULD4 1205 aa19.69■□□□□ 0.74
RER1-202ENST00000378512 B4DLN1 442 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 RXRAP19793 462 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 CDK7P50613 346 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 MRPL12P52815 198 aaKnown RBP19.68■□□□□ 0.74
RER1-202ENST00000378512 NOL8Q76FK4 1167 aaKnown RBP19.68■□□□□ 0.74
RER1-202ENST00000378512 NSUN6Q8TEA1 469 aaKnown RBP19.68■□□□□ 0.74
RER1-202ENST00000378512 GLT1D1Q96MS3 346 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 TBX21Q9UL17 535 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 STXBP5LQ9Y2K9 1186 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 DCDC2CA8MYV0 355 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 CFBP00751 764 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 PDE4DQ08499 809 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 FUT2Q10981 343 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 CXCL17Q6UXB2 119 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 TLK2Q86UE8 772 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 PCSK9Q8NBP7 692 aaKnown RBP19.68■□□□□ 0.74
RER1-202ENST00000378512 VTI1AQ96AJ9 217 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 RRP36Q96EU6 259 aaKnown RBP19.68■□□□□ 0.74
RER1-202ENST00000378512 TOX2Q96NM4 488 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 RMDN3Q96TC7 470 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 SPC25Q9HBM1 224 aa19.68■□□□□ 0.74
RER1-202ENST00000378512 ELP1O95163 1332 aa19.67■□□□□ 0.74
RER1-202ENST00000378512 NID2Q14112 1375 aa19.67■□□□□ 0.74
RER1-202ENST00000378512 MICU3Q86XE3 530 aa19.67■□□□□ 0.74
RER1-202ENST00000378512 JAKMIP1Q96N16 626 aaKnown RBP19.67■□□□□ 0.74
RER1-202ENST00000378512 WDR11Q9BZH6 1224 aa19.67■□□□□ 0.74
RER1-202ENST00000378512 PXMP2Q9NR77 195 aa19.67■□□□□ 0.74
RER1-202ENST00000378512 FAM217BQ9NTX9 383 aaPredicted RBP19.67■□□□□ 0.74
RER1-202ENST00000378512 RBM28Q9NW13 759 aaKnown RBP19.67■□□□□ 0.74
RER1-202ENST00000378512 CDH23Q9H251 3354 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 EYSQ5T1H1 3165 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 DYNC1LI2O43237 492 aaPredicted RBP19.66■□□□□ 0.74
RER1-202ENST00000378512 CPA1P15085 419 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 RPS6KB1P23443 525 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 FPGSQ05932 587 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 FAM109BQ6ICB4 259 aaPredicted RBP19.66■□□□□ 0.74
RER1-202ENST00000378512 CCDC62Q6P9F0 684 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 BLOC1S2Q6QNY1 142 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 CMTR1Q8N1G2 835 aaKnown RBP19.66■□□□□ 0.74
RER1-202ENST00000378512 SCFD2Q8WU76 684 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 GRIN2DO15399 1336 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 FRMPD4Q14CM0 1322 aa19.66■□□□□ 0.74
RER1-202ENST00000378512 A0A0C4DFX4 3053 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 A0A0U1RQG5 324 aaPredicted RBP19.65■□□□□ 0.74
RER1-202ENST00000378512 ARVCFO00192 962 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 NKRFO15226 690 aaKnown RBP eCLIP19.65■□□□□ 0.743e-7■□□□□ 10
RER1-202ENST00000378512 ZBTB43O43298 467 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 EVCP57679 992 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 SYNE3Q6ZMZ3 975 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 RAB11FIP4Q86YS3 637 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 FAM126BQ8IXS8 530 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 RNPC3Q96LT9 517 aaKnown RBP19.65■□□□□ 0.74
RER1-202ENST00000378512 PDCD2LQ9BRP1 358 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 TTYH1Q9H313 450 aaPredicted RBP19.65■□□□□ 0.74
RER1-202ENST00000378512 ZSWIM6Q9HCJ5 1215 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 CNTNAP5Q8WYK1 1306 aa19.65■□□□□ 0.74
RER1-202ENST00000378512 GCOM1H8Y6P7 765 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms