RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 FANCBQ8NB91 859 aa16.53■□□□□ 0.24
CLCN6-203ENST00000376490 NSUN6Q8TEA1 469 aaKnown RBP16.53■□□□□ 0.24
CLCN6-203ENST00000376490 VTI1AQ96AJ9 217 aa16.53■□□□□ 0.24
CLCN6-203ENST00000376490 SPZ1Q9BXG8 430 aa16.53■□□□□ 0.24
CLCN6-203ENST00000376490 STARD7Q9NQZ5 370 aa16.53■□□□□ 0.24
CLCN6-203ENST00000376490 Q9Y3F1 56 aa16.53■□□□□ 0.24
CLCN6-203ENST00000376490 EIF2AK2P19525 551 aaKnown RBP16.52■□□□□ 0.24
CLCN6-203ENST00000376490 MDM2Q00987 491 aaPredicted RBP16.52■□□□□ 0.24
CLCN6-203ENST00000376490 GHRHRQ02643 423 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 TRAF1Q13077 416 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 FSCN1Q16658 493 aaKnown RBP16.52■□□□□ 0.24
CLCN6-203ENST00000376490 ARHGEF16Q5VV41 709 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 SH3RF1Q7Z6J0 888 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 CCDC82Q8N4S0 544 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 RRP36Q96EU6 259 aaKnown RBP16.52■□□□□ 0.24
CLCN6-203ENST00000376490 GLT1D1Q96MS3 346 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 LZTS2Q9BRK4 669 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 BRPF3Q9ULD4 1205 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 SNX14Q9Y5W7 946 aa16.52■□□□□ 0.24
CLCN6-203ENST00000376490 REC8O95072 547 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 BMP8BP34820 402 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 GNAQP50148 359 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 CXCL17Q6UXB2 119 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 MICU3Q86XE3 530 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 COPS5Q92905 334 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 IWS1Q96ST2 819 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 PRDM5Q9NQX1 630 aaPredicted RBP16.51■□□□□ 0.23
CLCN6-203ENST00000376490 PXMP2Q9NR77 195 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 MAP3K20Q9NYL2 800 aaKnown RBP16.51■□□□□ 0.23
CLCN6-203ENST00000376490 PRKAG2Q9UGJ0 569 aa16.51■□□□□ 0.23
CLCN6-203ENST00000376490 DOCK5Q9H7D0 1870 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 ELP1O95163 1332 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 hCG_1642624A0A1W2PR95 340 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 TRIM43BA6NCK2 446 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 GCOM1H8Y6P7 765 aaPredicted RBP16.5■□□□□ 0.23
CLCN6-203ENST00000376490 PQBP1O60828 265 aaKnown RBP16.5■□□□□ 0.23
CLCN6-203ENST00000376490 NR3C2P08235 984 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 POLR2MP0CAP2 368 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 TXNP10599 105 aaKnown RBP16.5■□□□□ 0.23
CLCN6-203ENST00000376490 CDK7P50613 346 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 FXR1P51114 621 aaKnown RBP eCLIP16.5■□□□□ 0.23
CLCN6-203ENST00000376490 STXBP2Q15833 593 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 APOA5Q6Q788 366 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 FCHSD1Q86WN1 690 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 SAMD3Q8N6K7 520 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 SCFD2Q8WU76 684 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 TRIM43Q96BQ3 446 aaPredicted RBP16.5■□□□□ 0.23
CLCN6-203ENST00000376490 JAKMIP1Q96N16 626 aaKnown RBP16.5■□□□□ 0.23
CLCN6-203ENST00000376490 PDLIM7Q9NR12 457 aa16.5■□□□□ 0.23
CLCN6-203ENST00000376490 ARIH2O95376 493 aa16.49■□□□□ 0.23
CLCN6-203ENST00000376490 HMGB1P09429 215 aaKnown RBP16.49■□□□□ 0.23
CLCN6-203ENST00000376490 MYCLP12524 364 aaPredicted RBP16.49■□□□□ 0.23
CLCN6-203ENST00000376490 PPP2R5BQ15173 497 aa16.49■□□□□ 0.23
CLCN6-203ENST00000376490 ANKRD33Q7Z3H0 272 aa16.49■□□□□ 0.23
CLCN6-203ENST00000376490 OR6J1Q8NGC5 347 aa16.49■□□□□ 0.23
CLCN6-203ENST00000376490 LBHD1Q9BQE6 289 aaPredicted RBP16.49■□□□□ 0.23
CLCN6-203ENST00000376490 UBE2OQ9C0C9 1292 aaKnown RBP16.49■□□□□ 0.23
CLCN6-203ENST00000376490 SEC63Q9UGP8 760 aaKnown RBP16.49■□□□□ 0.23
CLCN6-203ENST00000376490 DCDC2CA8MYV0 355 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 ARVCFO00192 962 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 ZBTB43O43298 467 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 ZEB2O60315 1214 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 EIF3JO75822 258 aaKnown RBP16.48■□□□□ 0.23
CLCN6-203ENST00000376490 CLTBP09497 229 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 FAAP100Q0VG06 881 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 TTLL4Q14679 1199 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 LY6KQ17RY6 165 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 CCDC62Q6P9F0 684 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 Q6ZUG5 572 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 ZFP91Q96JP5 570 aaPredicted RBP16.48■□□□□ 0.23
CLCN6-203ENST00000376490 TOX2Q96NM4 488 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 PDCD2LQ9BRP1 358 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 USP26Q9BXU7 913 aa16.48■□□□□ 0.23
CLCN6-203ENST00000376490 GRIN2DO15399 1336 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
CLCN6-203ENST00000376490 KLF18A0A0U1RQI7 1052 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 A0A1W2PPC1 479 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 NKRFO15226 690 aaKnown RBP eCLIP16.47■□□□□ 0.23
CLCN6-203ENST00000376490 CABYRO75952 493 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 ITGB8P26012 769 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 PSMC6P62333 389 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 FGD1P98174 961 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 PGM5Q15124 567 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 BLOC1S2Q6QNY1 142 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 VSIG10LQ86VR7 867 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 IL31RAQ8NI17 732 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 BADQ92934 168 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 TMEM39AQ9NV64 488 aa16.47■□□□□ 0.23
CLCN6-203ENST00000376490 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
CLCN6-203ENST00000376490 SCN10AQ9Y5Y9 1956 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 RGS20O76081 388 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 MYL3P08590 195 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 RPS6KB1P23443 525 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 CPT1AP50416 773 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 APOBRQ0VD83 1088 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 ITGA7Q13683 1181 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 RTN1Q16799 776 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms