RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.19□□□□□ -0.945e-9■■□□□ 12.9
UBR4-202ENST00000375224 TTC36A6NLP5 189 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 PP2D1A8MPX8 630 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 USP17L10C9JJH3 530 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 TXKP42681 527 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 TNNI2P48788 182 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 CACNB3P54284 484 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 KMT5BQ4FZB7 885 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 E4F1Q66K89 784 aaPredicted RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 SV2BQ7L1I2 683 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 POTEDQ86YR6 584 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 SLC16A10Q8TF71 515 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 GMCL1Q96IK5 515 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 BAG1Q99933 345 aaPredicted RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 NAA15Q9BXJ9 866 aaKnown RBP9.19□□□□□ -0.94
UBR4-202ENST00000375224 EXOC1Q9NV70 894 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 ITIH6Q6UXX5 1313 aa9.19□□□□□ -0.94
UBR4-202ENST00000375224 BICDL2A1A5D9 508 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 AKR1B15C9JRZ8 316 aaPredicted RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 C21orf2O43822 256 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 MARCH6O60337 910 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 TRIM14Q14142 442 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 KRT79Q5XKE5 535 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 RSBN1LQ6PCB5 846 aaPredicted RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 SH3BP5LQ7L8J4 393 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 GIMAP8Q8ND71 665 aaPredicted RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 CCDC51Q96ER9 411 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 PPP1R13BQ96KQ4 1090 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 PANX2Q96RD6 677 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 TDRD3Q9H7E2 651 aaKnown RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 DDX41Q9UJV9 622 aaKnown RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 USP27XA6NNY8 438 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 SLC16A2P36021 539 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 PRCPP42785 496 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 BAG6P46379 1132 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 USP11P51784 963 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 AP3B2Q13367 1082 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 SEPT2Q15019 361 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 SYCP1Q15431 976 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 CNNM4Q6P4Q7 775 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 OGFOD1Q8N543 542 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 ANKRD7Q92527 254 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 THAP9Q9H5L6 903 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 SUFUQ9UMX1 484 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 EP400Q96L91 3159 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 KLRC4O43908 158 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 RAD21O60216 631 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 EEF1GP26641 437 aaKnown RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 QRICH1Q2TAL8 776 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 NBPF9Q3BBW0 867 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 COBLL1Q53SF7 1204 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 APTXQ7Z2E3 356 aaKnown RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 CNGA4Q8IV77 575 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 AMNQ9BXJ7 453 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 TRIM9Q9C026 710 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 CXorf56Q9H5V9 222 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 MAGEC2Q9UBF1 373 aaPredicted RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 DDX25Q9UHL0 483 aaKnown RBP9.18□□□□□ -0.94
UBR4-202ENST00000375224 PCDHA1Q9Y5I3 950 aa9.18□□□□□ -0.94
UBR4-202ENST00000375224 KCNJ18B7U540 433 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 F5H6K3 240 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 N4BP3O15049 544 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 PPP1R11O60927 126 aaPredicted RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 KLRC3Q07444 240 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 GPS2Q13227 327 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 KCNJ12Q14500 433 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 DLGAP5Q15398 846 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 CDC37Q16543 378 aaPredicted RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 TCP11X2Q5H9J9 407 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 MOXD1Q6UVY6 613 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 FAM114A1Q8IWE2 563 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 TC2NQ8N9U0 490 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 PRMT6Q96LA8 375 aaPredicted RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 CSRNP1Q96S65 589 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 ATF5Q9Y2D1 282 aaPredicted RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 GDAQ9Y2T3 454 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 PCDHAC2Q9Y5I4 1007 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 KDM3AQ9Y4C1 1321 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 PVALEFA0A1B0GWK0 134 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 YDJCA8MPS7 323 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 FOSP01100 380 aaPredicted RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 VIL1P09327 827 aaKnown RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 PBX1P40424 430 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 COPB1P53618 953 aaKnown RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 ASIC1P78348 528 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 PDE4DQ08499 809 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 KRT31Q15323 416 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 FKBP1CQ5VVH2 108 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 LARGE2Q8N3Y3 721 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 FAM151AQ8WW52 585 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 PLIN2Q99541 437 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 ARHGEF10LQ9HCE6 1279 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 STK24Q9Y6E0 443 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 ARFGEF1Q9Y6D6 1849 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 SPDYE2BA6NHP3 402 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 CTIFO43310 598 aaKnown RBP9.17□□□□□ -0.94
UBR4-202ENST00000375224 TDP2O95551 362 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 SPDYE6P0CI01 402 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 BMP3P12645 472 aa9.17□□□□□ -0.94
UBR4-202ENST00000375224 UBE2SQ16763 222 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms