RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 PEAK1Q9H792 1746 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 PHBP35232 272 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 USH1GQ495M9 461 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 CCDC13Q8IYE1 715 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 NT5C3AQ9H0P0 336 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 MINPP1Q9UNW1 487 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 ARHGAP42A6NI28 874 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 LARGE1O95461 756 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 DMTNQ08495 405 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 PPP2R5DQ14738 602 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 GSDMBQ8TAX9 411 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 PDLIM2Q96JY6 352 aa13.45□□□□□ -0.26
NPLOC4-202ENST00000374747 ABCC12Q96J65 1359 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 CMA1P23946 247 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 RNF26Q9BY78 433 aaPredicted RBP13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 ARHGAP44Q17R89 818 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 CMTR1Q8N1G2 835 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 Q9H521 79 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 PNMA2Q9UL42 364 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 PRKAB2O43741 272 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 SATB1Q01826 763 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 NKX1-1Q15270 411 aaPredicted RBP13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 TAF12Q16514 161 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 RC3H1Q5TC82 1133 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 CTAGE3PQ8IX95 158 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 CPXCR1Q8N123 301 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 SYNE4Q8N205 404 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 PPP4R1Q8TF05 950 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 VTI1AQ96AJ9 217 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 RIC8AQ9NPQ8 531 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 OPHN1O60890 802 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 CFBP00751 764 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 MECOMQ03112 1051 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 KRT12Q99456 494 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 CLTAP09496 248 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 XRCC5P13010 732 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 LRRC47Q8N1G4 583 aaKnown RBP13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 DBNDD1Q9H9R9 158 aa13.44□□□□□ -0.26
NPLOC4-202ENST00000374747 C3P01024 1663 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 CDC25BP30305 580 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 MAN1A1P33908 653 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 CCT5P48643 541 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 RAD51AP2Q09MP3 1159 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 ABCB5Q2M3G0 1257 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 STRBPQ96SI9 672 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 AP1ARQ63HQ0 302 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 NSUN7Q8NE18 718 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 DHX36Q9H2U1 1008 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 PYCARDQ9ULZ3 195 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 GPATCH4Q5T3I0 446 aaKnown RBP13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 SLFN13Q68D06 897 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 FANCLQ9NW38 375 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 KDM3AQ9Y4C1 1321 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 SH2B2O14492 632 aaPredicted RBP13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 CD19P15391 556 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 CCDC125Q86Z20 511 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 RTKN2Q8IZC4 609 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 PSTPIP2Q9H939 334 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 BIN2Q9UBW5 565 aaPredicted RBP13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 CDC23Q9UJX2 597 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 AFG3L2Q9Y4W6 797 aa13.43□□□□□ -0.26
NPLOC4-202ENST00000374747 ARHGAP23Q9P227 1491 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 FMNL1O95466 1100 aaPredicted RBP13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 ABCB4P21439 1286 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 LIFRP42702 1097 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 SLC12A2P55011 1212 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 ASPRV1Q53RT3 343 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 MAEAQ7L5Y9 396 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 CDAN1Q8IWY9 1227 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 MYOCDQ8IZQ8 938 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 BRIP1Q9BX63 1249 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 DPH5Q9H2P9 285 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 TYW1Q9NV66 732 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 BUB1O43683 1085 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 ADCY8P40145 1251 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 DPY19L2Q6NUT2 758 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 NSMFQ6X4W1 530 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 RSAD2Q8WXG1 361 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 PPP1R13BQ96KQ4 1090 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 SERPINB13Q9UIV8 391 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 RRP15Q9Y3B9 282 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 SPATA31A5Q5VU36 1347 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 FRMPD2Q68DX3 1309 aaPredicted RBP13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 SPATA31A7Q8IWB4 1347 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 BTBD18B2RXH4 712 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 BAG2O95816 211 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 LARSQ9P2J5 1176 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 CSADQ9Y600 493 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 MST1RQ04912 1400 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 EFCAB13Q8IY85 973 aa13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 MRPL11Q9Y3B7 192 aaKnown RBP13.42□□□□□ -0.26
NPLOC4-202ENST00000374747 MYCLP12524 364 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms