RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 LONRF2Q1L5Z9 754 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 CRACR2AQ9BSW2 395 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 ANKZF1Q9H8Y5 726 aa19.04■□□□□ 0.64
RXRB-201ENST00000374680 KIAA1551Q9HCM1 1747 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 ROBO3Q96MS0 1386 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 TULP1O00294 542 aaPredicted RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 EEF1GP26641 437 aaKnown RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 OAS2P29728 719 aaKnown RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 DNM2P50570 870 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 APBA1Q02410 837 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 UTP14CQ5TAP6 766 aaKnown RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 SLC30A10Q6XR72 485 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 SLF2Q8IX21 1173 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 LARP4BQ92615 738 aaKnown RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 THAP9Q9H5L6 903 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 CASZ1Q86V15 1759 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 STAT3P40763 770 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 DDX12PQ92771 950 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 ZFP91Q96JP5 570 aaPredicted RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 NHEJ1Q9H9Q4 299 aaPredicted RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 ZNHIT6Q9NWK9 470 aaKnown RBP19.03■□□□□ 0.64
RXRB-201ENST00000374680 MYO6Q9UM54 1294 aa19.03■□□□□ 0.64
RXRB-201ENST00000374680 CTAGE15A4D2H0 777 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 CTAGE8P0CG41 777 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 PRPHP41219 470 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 AMPD3Q01432 767 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 SMC1AQ14683 1233 aaKnown RBP19.02■□□□□ 0.64
RXRB-201ENST00000374680 CDC42EP5Q6NZY7 148 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 CTAGE6Q86UF2 777 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 C2CD5Q86YS7 1000 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 CTAGE4Q8IX94 777 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 DHTKD1Q96HY7 919 aaPredicted RBP19.02■□□□□ 0.64
RXRB-201ENST00000374680 RIOX1Q9H6W3 641 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 ABCB6Q9NP58 842 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 E9PMD0 336 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 LAD1O00515 517 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 GABPB1Q06547 395 aaPredicted RBP19.02■□□□□ 0.64
RXRB-201ENST00000374680 TMEM266Q2M3C6 531 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 USH1GQ495M9 461 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 KRT79Q5XKE5 535 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 TBC1D22AQ8WUA7 517 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 TRERF1Q96PN7 1200 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 NLRC4Q9NPP4 1024 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 FAM53CQ9NYF3 392 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 CAPN11Q9UMQ6 739 aa19.02■□□□□ 0.64
RXRB-201ENST00000374680 POLRMTO00411 1230 aaKnown RBP19.01■□□□□ 0.63
RXRB-201ENST00000374680 GDF11O95390 407 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 VSNL1P62760 191 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 ARID5AQ03989 594 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 AK8Q96MA6 479 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 FGFBP2Q9BYJ0 223 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 DDX25Q9UHL0 483 aaKnown RBP19.01■□□□□ 0.63
RXRB-201ENST00000374680 TTLL1O95922 423 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 SRGNP10124 158 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 FKBP15Q5T1M5 1219 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 JAKMIP2Q96AA8 810 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 C7orf25Q9BPX7 421 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 PSTPIP2Q9H939 334 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 IPO7O95373 1038 aaKnown RBP19.01■□□□□ 0.63
RXRB-201ENST00000374680 MATR3P43243 847 aaKnown RBP eCLIP19.01■□□□□ 0.63
RXRB-201ENST00000374680 MIIPQ5JXC2 388 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 CEP112Q8N8E3 955 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 PLEKHA4Q9H4M7 779 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 JADE2Q9NQC1 790 aa19.01■□□□□ 0.63
RXRB-201ENST00000374680 SHMT1P34896 483 aa19■□□□□ 0.63
RXRB-201ENST00000374680 TRIM14Q14142 442 aa19■□□□□ 0.63
RXRB-201ENST00000374680 CNNM4Q6P4Q7 775 aa19■□□□□ 0.63
RXRB-201ENST00000374680 NEK11Q8NG66 645 aa19■□□□□ 0.63
RXRB-201ENST00000374680 MTMR9Q96QG7 549 aa19■□□□□ 0.63
RXRB-201ENST00000374680 FUT8Q9BYC5 575 aa19■□□□□ 0.63
RXRB-201ENST00000374680 BICDL2A1A5D9 508 aa19■□□□□ 0.63
RXRB-201ENST00000374680 MEIS1O00470 390 aa19■□□□□ 0.63
RXRB-201ENST00000374680 N4BP1O75113 896 aaKnown RBP19■□□□□ 0.63
RXRB-201ENST00000374680 ZNF543Q08ER8 600 aa19■□□□□ 0.63
RXRB-201ENST00000374680 RRAGAQ7L523 313 aa19■□□□□ 0.63
RXRB-201ENST00000374680 CCDC42Q96M95 316 aa19■□□□□ 0.63
RXRB-201ENST00000374680 MMS19Q96T76 1030 aa19■□□□□ 0.63
RXRB-201ENST00000374680 KIAA1024Q9UPX6 916 aa19■□□□□ 0.63
RXRB-201ENST00000374680 CXCR5P32302 372 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 CERKQ8TCT0 537 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 DEF6Q9H4E7 631 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 QTRT2Q9H974 415 aaKnown RBP18.99■□□□□ 0.63
RXRB-201ENST00000374680 PDE11AQ9HCR9 933 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 SMARCAL1Q9NZC9 954 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 PCDHA12Q9UN75 941 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 LTBP4Q8N2S1 1624 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 GAKO14976 1311 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 TRAF5O00463 557 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 GSPT2Q8IYD1 628 aaKnown RBP18.99■□□□□ 0.63
RXRB-201ENST00000374680 SPICE1Q8N0Z3 855 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 CAGE1Q8TC20 777 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 MLXIPQ9HAP2 919 aa18.99■□□□□ 0.63
RXRB-201ENST00000374680 KCTD19Q17RG1 926 aaPredicted RBP18.98■□□□□ 0.63
RXRB-201ENST00000374680 PROM2Q8N271 834 aa18.98■□□□□ 0.63
RXRB-201ENST00000374680 FAM163AQ96GL9 167 aaPredicted RBP18.98■□□□□ 0.63
RXRB-201ENST00000374680 DNAJC7Q99615 494 aa18.98■□□□□ 0.63
RXRB-201ENST00000374680 PNMA6FA0A0J9YX94 578 aa18.98■□□□□ 0.63
RXRB-201ENST00000374680 POTEB3A0JP26 581 aa18.98■□□□□ 0.63
RXRB-201ENST00000374680 POTECB2RU33 542 aa18.98■□□□□ 0.63
RXRB-201ENST00000374680 GABPAQ06546 454 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms