RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 IRF2BP1Q8IU81 584 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 SAMD3Q8N6K7 520 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 NUP88Q99567 741 aaPredicted RBP14.15□□□□□ -0.14
PRPF4-202ENST00000374199 KIAA1683Q9H0B3 1180 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 SH2D4AQ9H788 454 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 TMEM232C9JQI7 657 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 ASNSP08243 561 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 PPP1R2P41236 205 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 TECP42680 631 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 B3GNT9Q6UX72 402 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 NYAP1Q6ZVC0 841 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 HSD17B4P51659 736 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 UBASH3AP57075 661 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 ECM1Q16610 540 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 RAD54LQ92698 747 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 BLZF1Q9H2G9 400 aa14.15□□□□□ -0.14
PRPF4-202ENST00000374199 SAMSN1Q9NSI8 373 aaKnown RBP14.15□□□□□ -0.14
PRPF4-202ENST00000374199 LRRC37A2A6NM11 1700 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 CTNND1O60716 968 aaKnown RBP14.14□□□□□ -0.15
PRPF4-202ENST00000374199 PRCPP42785 496 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 TNNI2P48788 182 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 TNFAIP1Q13829 316 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 TTI2Q6NXR4 508 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 LPAR1Q92633 364 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 MAF1Q9H063 256 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 VAV3Q9UKW4 847 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L15C9J2P7 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L13C9JLJ4 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L11C9JVI0 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L18D6R9N7 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L22D6RA61 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L17D6RBQ6 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L19D6RCP7 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L20D6RJB6 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L24Q0WX57 530 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 USP17L6PQ6QN14 398 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 SLFN12Q8IYM2 578 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 JDP2Q8WYK2 163 aa14.14□□□□□ -0.15
PRPF4-202ENST00000374199 DHTKD1Q96HY7 919 aaPredicted RBP14.14□□□□□ -0.15
PRPF4-202ENST00000374199 GTF2F1P35269 517 aaKnown RBP eCLIP14.13□□□□□ -0.15
PRPF4-202ENST00000374199 ARHGAP4P98171 946 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 ZC3H3Q8IXZ2 948 aaKnown RBP14.13□□□□□ -0.15
PRPF4-202ENST00000374199 NUDT12Q9BQG2 462 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 WDR18Q9BV38 432 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 STK24Q9Y6E0 443 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 PLCB2Q00722 1185 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 PAK1Q13153 545 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 RASA3Q14644 834 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 DNAJC19Q96DA6 116 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 FAM20AQ96MK3 541 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 RAB34Q9BZG1 259 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 LRWD1Q9UFC0 647 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 ABCB11O95342 1321 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 ZNF541Q9H0D2 1346 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 KDM3AQ9Y4C1 1321 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 TMEM266Q2M3C6 531 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 TRMT44Q8IYL2 757 aaKnown RBP14.13□□□□□ -0.15
PRPF4-202ENST00000374199 UPF1Q92900 1129 aaKnown RBP eCLIP14.13□□□□□ -0.153e-7■■□□□ 13.9
PRPF4-202ENST00000374199 C12orf42Q96LP6 360 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 CTAGE1Q96RT6 745 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 THAP9Q9H5L6 903 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 PPP2R3BQ9Y5P8 575 aa14.13□□□□□ -0.15
PRPF4-202ENST00000374199 FAM86B1E9PN63 330 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 FAM86B2P0C5J1 330 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 GMPSP49915 693 aaPredicted RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 FAM83BQ5T0W9 1011 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 UNC13DQ70J99 1090 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 FCHSD1Q86WN1 690 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 CHURC1Q8WUH1 139 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 DUSP9Q99956 384 aaKnown RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 MAP3K20Q9NYL2 800 aaKnown RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 ADAMTS5Q9UNA0 930 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 H7C1D1 291 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 WDR46O15213 610 aaKnown RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 NOL9Q5SY16 702 aaKnown RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 KCNK18Q7Z418 384 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 SMYD4Q8IYR2 804 aaPredicted RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 KIAA0895Q8NCT3 520 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 GLIS2Q9BZE0 524 aaPredicted RBP14.12□□□□□ -0.15
PRPF4-202ENST00000374199 GDAQ9Y2T3 454 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 WDR81Q562E7 1941 aa14.12□□□□□ -0.15
PRPF4-202ENST00000374199 MYMKA6NI61 221 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 ATP2B2Q01814 1243 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 CENPPQ6IPU0 288 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 ZNF507Q8TCN5 953 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 NOC3LQ8WTT2 800 aaKnown RBP14.11□□□□□ -0.15
PRPF4-202ENST00000374199 LARP4BQ92615 738 aaKnown RBP14.11□□□□□ -0.15
PRPF4-202ENST00000374199 PITPNM2Q9BZ72 1349 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 POTEMA6NI47 508 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 ICAM1P05362 532 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 MUTP22033 750 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 TXKP42681 527 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 PMS1P54277 932 aaKnown RBP14.11□□□□□ -0.15
PRPF4-202ENST00000374199 AMPD3Q01432 767 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 RASSF7Q02833 373 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 PSMD2Q13200 908 aa14.11□□□□□ -0.15
PRPF4-202ENST00000374199 SPECC1LQ69YQ0 1117 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms