RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 MYL10Q9BUA6 226 aa14.27□□□□□ -0.12
PRPF4-201ENST00000374198 NDST4Q9H3R1 872 aa14.27□□□□□ -0.12
PRPF4-201ENST00000374198 GSTA1P08263 222 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 BLMHQ13867 455 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 NFXL1Q6ZNB6 911 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 PNMA8AQ86V59 439 aaPredicted RBP14.27□□□□□ -0.13
PRPF4-201ENST00000374198 AGAP11Q8TF27 550 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 METTL22Q9BUU2 404 aaPredicted RBP14.27□□□□□ -0.13
PRPF4-201ENST00000374198 BLZF1Q9H2G9 400 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 SLC5A4Q9NY91 659 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 SLC12A4Q9UP95 1085 aa14.27□□□□□ -0.13
PRPF4-201ENST00000374198 MEGF6O75095 1541 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 PDS5AQ29RF7 1337 aaKnown RBP14.26□□□□□ -0.13
PRPF4-201ENST00000374198 PHF20L1A8MW92 1017 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 IFIT3O14879 490 aaKnown RBP14.26□□□□□ -0.13
PRPF4-201ENST00000374198 TRIM21P19474 475 aaKnown RBP14.26□□□□□ -0.13
PRPF4-201ENST00000374198 DRD4P21917 467 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 ZBED6P86452 979 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 BIRC3Q13489 604 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 CFAP221Q4G0U5 840 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 KRT26Q7Z3Y9 468 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 CABP5Q9NP86 173 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 XDHP47989 1333 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 A6NHS1 94 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 NCK2O43639 380 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 ORC4O43929 436 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 LINGO3P0C6S8 592 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 PPP2R2AP63151 447 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 CDK17Q00537 523 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 SLC30A9Q6PML9 568 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 NOC3LQ8WTT2 800 aaKnown RBP14.26□□□□□ -0.13
PRPF4-201ENST00000374198 MS4A14Q96JA4 679 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 CCDC42Q96M95 316 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 IFIH1Q9BYX4 1025 aaKnown RBP14.26□□□□□ -0.13
PRPF4-201ENST00000374198 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
PRPF4-201ENST00000374198 CNOT8Q9UFF9 292 aaKnown RBP14.26□□□□□ -0.13
PRPF4-201ENST00000374198 F8W031 263 aaPredicted RBP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 DIAPH2O60879 1101 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 DNM2P50570 870 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 ODF2Q5BJF6 829 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 AKAP4Q5JQC9 854 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 ZNF658Q5TYW1 1059 aaPredicted RBP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 CCDC155Q8N6L0 562 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 DRAXINQ8NBI3 349 aaPredicted RBP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 RETREG2Q8NC44 543 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 CNKSR1Q969H4 720 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 PANK4Q9NVE7 773 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 PCDHA13Q9Y5I0 950 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 CFAP73A6NFT4 308 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 RASSF10A6NK89 507 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 H0YGN5 161 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 RTN3O95197 1032 aaPredicted RBP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 ZFYP08048 801 aaPredicted RBP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 SRGNP10124 158 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 NEFHP12036 1026 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 ALADP13716 330 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 EEF1GP26641 437 aaKnown RBP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 FKBP4Q02790 459 aaKnown RBP eCLIP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 CTDSPL2Q05D32 466 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 ZNF268Q14587 947 aaPredicted RBP14.25□□□□□ -0.13
PRPF4-201ENST00000374198 ATG9AQ7Z3C6 839 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 CCDC197Q8NCU1 140 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 IGDCC4Q8TDY8 1250 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 TMEM87BQ96K49 555 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 TLR10Q9BXR5 811 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 RNF14Q9UBS8 474 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 MAPK8IP1Q9UQF2 711 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 PCDHGC5Q9Y5F6 944 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 NFS1Q9Y697 457 aa14.25□□□□□ -0.13
PRPF4-201ENST00000374198 IFNAR1P17181 557 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 HSD17B3P37058 310 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 TRADDQ15628 312 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 RUFY4Q6ZNE9 571 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 TBC1D1Q86TI0 1168 aaPredicted RBP14.24□□□□□ -0.13
PRPF4-201ENST00000374198 TBC1D10CQ8IV04 446 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 OXER1Q8TDS5 423 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 PUS7LQ9H0K6 701 aaKnown RBP14.24□□□□□ -0.13
PRPF4-201ENST00000374198 TRIM75PA6NK02 468 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 PRCPP42785 496 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 ZNF844Q08AG5 666 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 MKRN4PQ13434 485 aaPredicted RBP14.24□□□□□ -0.13
PRPF4-201ENST00000374198 TBC1D25Q3MII6 688 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 CWF19L1Q69YN2 538 aaKnown RBP14.24□□□□□ -0.13
PRPF4-201ENST00000374198 SGMS1Q86VZ5 419 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 MFN1Q8IWA4 741 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 OR2W6PQ8NHA6 318 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 LY9Q9HBG7 655 aa14.24□□□□□ -0.13
PRPF4-201ENST00000374198 PAPOLAP51003 745 aaKnown RBP14.23□□□□□ -0.13
PRPF4-201ENST00000374198 PSMD2Q13200 908 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 ZNF530Q6P9A1 599 aaPredicted RBP14.23□□□□□ -0.13
PRPF4-201ENST00000374198 KCNMB3Q9NPA1 279 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 SWAP70Q9UH65 585 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 ZBTB12Q9Y330 459 aaPredicted RBP14.23□□□□□ -0.13
PRPF4-201ENST00000374198 KAT6BQ8WYB5 2073 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 TRIM49BA6NDI0 452 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 B4DLN1 442 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 RNMTO43148 476 aaKnown RBP14.23□□□□□ -0.13
PRPF4-201ENST00000374198 AGBL2Q5U5Z8 902 aa14.23□□□□□ -0.13
PRPF4-201ENST00000374198 ANKS4BQ8N8V4 417 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms