RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 HAUS8Q9BT25 410 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 ZNF277Q9NRM2 450 aaPredicted RBP15.64■□□□□ 0.09
TRAF1-201ENST00000373887 KCNQ2O43526 872 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 TTLL1O95922 423 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 CACNB1Q02641 598 aaPredicted RBP15.64■□□□□ 0.09
TRAF1-201ENST00000373887 GRAPQ13588 217 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 GRAPLQ8TC17 118 aaPredicted RBP15.64■□□□□ 0.09
TRAF1-201ENST00000373887 EEF2KMTQ96G04 330 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 NT5C3AQ9H0P0 336 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.64■□□□□ 0.09
TRAF1-201ENST00000373887 KIF1BO60333 1816 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 SASH1O94885 1247 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 CDR2Q01850 454 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 SYNE4Q8N205 404 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 PSPC1Q8WXF1 523 aaKnown RBP15.64■□□□□ 0.09
TRAF1-201ENST00000373887 MASTLQ96GX5 879 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 ADPGKQ9BRR6 497 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 RRAGDQ9NQL2 400 aaPredicted RBP15.64■□□□□ 0.09
TRAF1-201ENST00000373887 MAIP1Q8WWC4 291 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 COA7Q96BR5 231 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 SDCCAG3Q96C92 435 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 LRGUKQ96M69 825 aa15.64■□□□□ 0.09
TRAF1-201ENST00000373887 IRX4P78413 519 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 IMPACTQ9P2X3 320 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 KDM3AQ9Y4C1 1321 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 BTBD18B2RXH4 712 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 CAPN9O14815 690 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 ARPP19P56211 112 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 DESI2Q9BSY9 194 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 SLC39A2Q9NP94 309 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 RNF181Q9P0P0 153 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 ADCY9O60503 1353 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 ARHGAP6O43182 974 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 HIP1RO75146 1068 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 CLTAP09496 248 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 MECOMQ03112 1051 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 DMP1Q13316 513 aaPredicted RBP15.63■□□□□ 0.09
TRAF1-201ENST00000373887 TBC1D9BQ66K14 1250 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 MYRIPQ8NFW9 859 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 ZNF577Q9BSK1 485 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 RIC8AQ9NPQ8 531 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 FMNL1O95466 1100 aaPredicted RBP15.63■□□□□ 0.09
TRAF1-201ENST00000373887 MARK3P27448 753 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 NOSTRINQ8IVI9 506 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 AXIN2Q9Y2T1 843 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 ERBB4Q15303 1308 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 KDM6BO15054 1643 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 SNAP23O00161 211 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 THAP12O43422 761 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 P4HA1P13674 534 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 IREB2P48200 963 aaKnown RBP15.63■□□□□ 0.09
TRAF1-201ENST00000373887 ZSCAN26Q16670 478 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 MUM1L1Q5H9M0 696 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 HP1BP3Q5SSJ5 553 aaPredicted RBP15.63■□□□□ 0.09
TRAF1-201ENST00000373887 FAM160B1Q5W0V3 765 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 ANKARQ7Z5J8 1434 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 MAGI2Q86UL8 1455 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 NME8Q8N427 588 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 PIGSQ96S52 555 aa15.63■□□□□ 0.09
TRAF1-201ENST00000373887 SPATA31A3Q5VYP0 1347 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 TNNC2P02585 160 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 OR52Z1P0C646 297 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 ZNF827Q17R98 1081 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 ZNF589Q86UQ0 364 aaPredicted RBP15.62■□□□□ 0.09
TRAF1-201ENST00000373887 SLFN12Q8IYM2 578 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 ABI1Q8IZP0 508 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 SAR1BQ9Y6B6 198 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 LIG3P49916 1009 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 USP17L2Q6R6M4 530 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 MCUQ8NE86 351 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 CD2APQ9Y5K6 639 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 TMOD1P28289 359 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 FOXD4Q12950 439 aaPredicted RBP15.62■□□□□ 0.09
TRAF1-201ENST00000373887 PUS7LQ9H0K6 701 aaKnown RBP15.62■□□□□ 0.09
TRAF1-201ENST00000373887 Q9H521 79 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 ABCA8O94911 1581 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 ZBTB24O43167 697 aaPredicted RBP15.62■□□□□ 0.09
TRAF1-201ENST00000373887 ECE1P42892 770 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 USP14P54578 494 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 LRCH2Q5VUJ6 765 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 FAM196BA6NMK8 535 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 SLC12A1Q13621 1099 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 RPS6KC1Q96S38 1066 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 NRBP2Q9NSY0 501 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 LRFN2Q9ULH4 789 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 PPP1R9AQ9ULJ8 1098 aa15.62■□□□□ 0.09
TRAF1-201ENST00000373887 GABPB1Q06547 395 aaPredicted RBP15.61■□□□□ 0.09
TRAF1-201ENST00000373887 RCN2Q14257 317 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 FAM178BQ8IXR5 827 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 ZNF341Q9BYN7 854 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 TRIM4Q9C037 500 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 MAGED2Q9UNF1 606 aaPredicted RBP15.61■□□□□ 0.09
TRAF1-201ENST00000373887 MEIS1O00470 390 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 APOEP02649 317 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 TSC1Q92574 1164 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 NUB1Q9Y5A7 615 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 MAD1L1Q9Y6D9 718 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 MAP3K4Q9Y6R4 1608 aa15.61■□□□□ 0.09
TRAF1-201ENST00000373887 CIAO1O76071 339 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms