RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 DDX12PQ92771 950 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 CGNQ9P2M7 1197 aaKnown RBP13.13□□□□□ -0.31
PDE6C-201ENST00000371447 ROBO3Q96MS0 1386 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 POTEB3A0JP26 581 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 POTECB2RU33 542 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 F5H6K3 240 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 H7C1D1 291 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 PPP2R3AQ06190 1150 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 KLRC3Q07444 240 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 POTEBQ6S5H4 581 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 SH3BP5LQ7L8J4 393 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 CYP2W1Q8TAV3 490 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 PSMB7Q99436 277 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 PYM1Q9BRP8 204 aaKnown RBP13.13□□□□□ -0.31
PDE6C-201ENST00000371447 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 ZNF277Q9NRM2 450 aaPredicted RBP13.13□□□□□ -0.31
PDE6C-201ENST00000371447 FAM198AQ9UFP1 575 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 ZBTB5O15062 677 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 RHOXF2BP0C7M4 288 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 ZNF76P36508 570 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 EZH2Q15910 746 aaKnown RBP13.13□□□□□ -0.31
PDE6C-201ENST00000371447 ABCB5Q2M3G0 1257 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 NCAPH2Q6IBW4 605 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 P2RX5Q93086 422 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 CAPZA3Q96KX2 299 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 RHOXF2Q9BQY4 288 aa13.13□□□□□ -0.31
PDE6C-201ENST00000371447 MACROD2A1Z1Q3 448 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 APBA1Q02410 837 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 SPAG1Q07617 926 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 ANKRD13CQ8N6S4 541 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 MB21D1Q8N884 522 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 KIAA0895Q8NCT3 520 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 ZHX1Q9UKY1 873 aaPredicted RBP13.12□□□□□ -0.31
PDE6C-201ENST00000371447 CFBP00751 764 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 AMPD3Q01432 767 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 KIAA1328Q86T90 577 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 DAGLBQ8NCG7 672 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 SMCR8Q8TEV9 937 aaPredicted RBP13.12□□□□□ -0.31
PDE6C-201ENST00000371447 NOC3LQ8WTT2 800 aaKnown RBP13.12□□□□□ -0.31
PDE6C-201ENST00000371447 PNMA5Q96PV4 448 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 DUSP9Q99956 384 aaKnown RBP13.12□□□□□ -0.31
PDE6C-201ENST00000371447 RREB1Q92766 1687 aa13.12□□□□□ -0.31
PDE6C-201ENST00000371447 POTEFA5A3E0 1075 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 SFI1A8K8P3 1242 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 MYO1BO43795 1136 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 POTEIP0CG38 1075 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 POTEGQ6S5H5 508 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 POTEEQ6S8J3 1075 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 KRT26Q7Z3Y9 468 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 GIMAP8Q8ND71 665 aaPredicted RBP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 TBC1D5Q92609 795 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 FGFBP2Q9BYJ0 223 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 NLRC4Q9NPP4 1024 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 BLOC1S4Q9NUP1 217 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 PI4KBQ9UBF8 816 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 HDAC6Q9UBN7 1215 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 POLR3GO15318 223 aaPredicted RBP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 EDIL3O43854 480 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 PLEKP08567 350 aaPredicted RBP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 PABPC4Q13310 644 aaKnown RBP eCLIP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 HERC4Q5GLZ8 1057 aaPredicted RBP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 TTI2Q6NXR4 508 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 PODNQ7Z5L7 613 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 CERS3Q8IU89 383 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 ZNF397Q8NF99 534 aaPredicted RBP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 KIFC2Q96AC6 838 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 SEMA6BQ9H3T3 888 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 LIMA1Q9UHB6 759 aaKnown RBP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 DUSP10Q9Y6W6 482 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 TRAF5O00463 557 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 SRGAP2O75044 1071 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 RHOBTB3O94955 611 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 CLCN6P51797 869 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 MAPK8IP2Q13387 824 aaPredicted RBP13.11□□□□□ -0.31
PDE6C-201ENST00000371447 ACER1Q8TDN7 264 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 PANX2Q96RD6 677 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 RAB34Q9BZG1 259 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 CCDC88AQ3V6T2 1871 aa13.11□□□□□ -0.31
PDE6C-201ENST00000371447 MRPS25P82663 173 aaKnown RBP13.1□□□□□ -0.31
PDE6C-201ENST00000371447 RRP1BQ14684 758 aaKnown RBP13.1□□□□□ -0.31
PDE6C-201ENST00000371447 HOMEZQ8IX15 550 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 NDUFB10O96000 172 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 LARGE2Q8N3Y3 721 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 HAS1Q92839 578 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
PDE6C-201ENST00000371447 PBX1P40424 430 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 NAP1L1P55209 391 aaKnown RBP13.1□□□□□ -0.31
PDE6C-201ENST00000371447 CCDC40Q4G0X9 1142 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 TBC1D10BQ4KMP7 808 aaPredicted RBP13.1□□□□□ -0.31
PDE6C-201ENST00000371447 CYP26C1Q6V0L0 522 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 MAEAQ7L5Y9 396 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 L2HGDHQ9H9P8 463 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDE6C-201ENST00000371447 SWAP70Q9UH65 585 aa13.1□□□□□ -0.31
PDE6C-201ENST00000371447 EPN1Q9Y6I3 576 aaPredicted RBP13.1□□□□□ -0.31
PDE6C-201ENST00000371447 LGALS16A8MUM7 142 aa13.09□□□□□ -0.31
PDE6C-201ENST00000371447 DDX39AO00148 427 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms