RNA–Protein interactions for RNA: ENST00000370654.5

RPF1-201, Transcript of ribosome production factor 1 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPF1, Length 1,385 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-201ENST00000370654 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
RPF1-201ENST00000370654 NBPF20Q3BBV1 942 aa15.4■□□□□ 0.06
RPF1-201ENST00000370654 PSRC1Q6PGN9 363 aaPredicted RBP15.4■□□□□ 0.06
RPF1-201ENST00000370654 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
RPF1-201ENST00000370654 DNERQ8NFT8 737 aa15.4■□□□□ 0.06
RPF1-201ENST00000370654 SENP2Q9HC62 589 aa15.4■□□□□ 0.06
RPF1-201ENST00000370654 PRDM6Q9NQX0 595 aa15.4■□□□□ 0.06
RPF1-201ENST00000370654 LOC102724159A0A0B4J2E5 919 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 PPP1R11O60927 126 aaPredicted RBP15.39■□□□□ 0.05
RPF1-201ENST00000370654 FGBP02675 491 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 TXNP10599 105 aaKnown RBP15.39■□□□□ 0.05
RPF1-201ENST00000370654 MYOGP15173 224 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 RABGGTBP53611 331 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 PTH1RQ03431 593 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 PPP2R5BQ15173 497 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 PWP2Q15269 919 aaKnown RBP15.39■□□□□ 0.05
RPF1-201ENST00000370654 SEC23AQ15436 765 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 IMMTQ16891 758 aaKnown RBP15.39■□□□□ 0.05
RPF1-201ENST00000370654 LY6KQ17RY6 165 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 CCDC62Q6P9F0 684 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 RGS22Q8NE09 1264 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 MTG1Q9BT17 334 aaPredicted RBP15.39■□□□□ 0.05
RPF1-201ENST00000370654 NKX2-4Q9H2Z4 354 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 PRDM12Q9H4Q4 367 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 GBF1Q92538 1859 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 SCN10AQ9Y5Y9 1956 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 SCN5AQ14524 2016 aa15.39■□□□□ 0.05
RPF1-201ENST00000370654 A6NJR5 290 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 HIP1O00291 1037 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 CPT1AP50416 773 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 ADGRE1Q14246 886 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 TTLL4Q14679 1199 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 TTC22Q5TAA0 569 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 SEPT14Q6ZU15 432 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 SCFD2Q8WU76 684 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 CTAGE1Q96RT6 745 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 POLR3EQ9NVU0 708 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 CUL9Q8IWT3 2517 aa15.38■□□□□ 0.05
RPF1-201ENST00000370654 PARP1P09874 1014 aaKnown RBP15.37■□□□□ 0.05
RPF1-201ENST00000370654 ASPRV1Q53RT3 343 aa15.37■□□□□ 0.05
RPF1-201ENST00000370654 FAM47CQ5HY64 1035 aa15.37■□□□□ 0.05
RPF1-201ENST00000370654 AFG1LQ8WV93 481 aa15.37■□□□□ 0.05
RPF1-201ENST00000370654 PNMA2Q9UL42 364 aa15.37■□□□□ 0.05
RPF1-201ENST00000370654 ABCB11O95342 1321 aa15.37■□□□□ 0.05
RPF1-201ENST00000370654 CHMP4BP1P59074 171 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 ARHGAP1Q07960 439 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 CCDC178Q5BJE1 867 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 DEFB128Q7Z7B8 93 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 FBXO11Q86XK2 927 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 KAT2BQ92831 832 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 KRT23Q9C075 422 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 MAD2L2Q9UI95 211 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 CHD9Q3L8U1 2897 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 NKRFO15226 690 aaKnown RBP eCLIP15.36■□□□□ 0.05
RPF1-201ENST00000370654 DHX16O60231 1041 aaKnown RBP15.36■□□□□ 0.05
RPF1-201ENST00000370654 CYP21A2P08686 494 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 EIF2AK2P19525 551 aaKnown RBP15.36■□□□□ 0.05
RPF1-201ENST00000370654 CHMLP26374 656 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 IFIT1BQ5T764 474 aaKnown RBP15.36■□□□□ 0.05
RPF1-201ENST00000370654 STOX1Q6ZVD7 989 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 CHST3Q7LGC8 479 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 MTMR8Q96EF0 704 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 ZFP91Q96JP5 570 aaPredicted RBP15.36■□□□□ 0.05
RPF1-201ENST00000370654 RMDN3Q96TC7 470 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 UBAC1Q9BSL1 405 aa15.36■□□□□ 0.05
RPF1-201ENST00000370654 GPHNQ9NQX3 736 aaPredicted RBP15.36■□□□□ 0.05
RPF1-201ENST00000370654 SPTBN5Q9NRC6 3674 aaKnown RBP15.36■□□□□ 0.05
RPF1-201ENST00000370654 MYH6P13533 1939 aa15.35■□□□□ 0.05
RPF1-201ENST00000370654 PALM3A6NDB9 673 aaPredicted RBP15.35■□□□□ 0.05
RPF1-201ENST00000370654 KLRF2D3W0D1 207 aa15.35■□□□□ 0.05
RPF1-201ENST00000370654 RGS20O76081 388 aa15.35■□□□□ 0.05
RPF1-201ENST00000370654 MMP3P08254 477 aa15.35■□□□□ 0.05
RPF1-201ENST00000370654 COL9A3Q14050 684 aaPredicted RBP15.35■□□□□ 0.05
RPF1-201ENST00000370654 GPNMBQ14956 572 aa15.35■□□□□ 0.05
RPF1-201ENST00000370654 NSUN6Q8TEA1 469 aaKnown RBP15.35■□□□□ 0.05
RPF1-201ENST00000370654 PPM1EQ8WY54 764 aa15.35■□□□□ 0.05
RPF1-201ENST00000370654 KIAA1217Q5T5P2 1943 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 MYO9BQ13459 2157 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 SORBS3O60504 671 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 ARHGEF15O94989 841 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 CFBP00751 764 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 NR3C2P08235 984 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 SUPT20HL2P0C7V6 817 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 HOXA13P31271 388 aaPredicted RBP15.34■□□□□ 0.05
RPF1-201ENST00000370654 NT5C2P49902 561 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 HSD17B4P51659 736 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 GDF6Q6KF10 455 aaPredicted RBP15.34■□□□□ 0.05
RPF1-201ENST00000370654 NFRKBQ6P4R8 1299 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 IL31RAQ8NI17 732 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 DHX38Q92620 1227 aaKnown RBP15.34■□□□□ 0.05
RPF1-201ENST00000370654 CNNM2Q9H8M5 875 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 PXMP2Q9NR77 195 aa15.34■□□□□ 0.05
RPF1-201ENST00000370654 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
RPF1-201ENST00000370654 MRPL11Q9Y3B7 192 aaKnown RBP15.34■□□□□ 0.05
RPF1-201ENST00000370654 TET1Q8NFU7 2136 aa15.33■□□□□ 0.05
RPF1-201ENST00000370654 ZBBXA8MT70 800 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 CYTH3O43739 400 aa15.33■□□□□ 0.04
RPF1-201ENST00000370654 GH1P01241 217 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms