RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 DMTNQ08495 405 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 SPATA1Q5VX52 437 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 CCDC127Q96BQ5 260 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 KRT82Q9NSB4 513 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 FIS1Q9Y3D6 152 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 SPDYE2BA6NHP3 402 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 MCF2LO15068 1137 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 TMEM191BP0C7N4 346 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 SPDYE6P0CI01 402 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 KIF22Q14807 665 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 SFMBT1Q9UHJ3 866 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 ADCY9O60503 1353 aa13.52□□□□□ -0.25
HCFC1-202ENST00000369984 H0YCG3 227 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 ADCY1Q08828 1119 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 YY1AP1Q9H869 796 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 METTL14Q9HCE5 456 aaKnown RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 MAGED2Q9UNF1 606 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 ZFXP17010 805 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 EPHB4P54760 987 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 PRKG1Q13976 671 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 KRT80Q6KB66 452 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 SGO2Q562F6 1265 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 ANGPTL2Q9UKU9 493 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 H0YIN7 160 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 PTK2Q05397 1052 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 GPT2Q8TD30 523 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 SSH2Q76I76 1423 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 CXCR5P32302 372 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 PMS1P54277 932 aaKnown RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 NEK8Q86SG6 692 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 PTGDRQ13258 359 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 C16orf87Q6PH81 154 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 PAWRQ96IZ0 340 aaKnown RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 POLR3CQ9BUI4 534 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 COL4A3BPQ9Y5P4 624 aa13.51□□□□□ -0.25
HCFC1-202ENST00000369984 GTPBP6O43824 516 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 TRMT10CQ7L0Y3 403 aaKnown RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 MYLK4Q86YV6 388 aaPredicted RBP13.51□□□□□ -0.25
HCFC1-202ENST00000369984 LRRIQ4A6NIV6 560 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 MYO1FO00160 1098 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 CTNND1O60716 968 aaKnown RBP13.5□□□□□ -0.25
HCFC1-202ENST00000369984 SLMAPQ14BN4 828 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 MCTP2Q6DN12 878 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 MAP7D3Q8IWC1 876 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 TYW5A2RUC4 315 aaKnown RBP13.5□□□□□ -0.25
HCFC1-202ENST00000369984 SEC31AO94979 1220 aaKnown RBP13.5□□□□□ -0.25
HCFC1-202ENST00000369984 NCF2P19878 526 aaPredicted RBP13.5□□□□□ -0.25
HCFC1-202ENST00000369984 EEF2KMTQ96G04 330 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 MAPK4P31152 587 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 COPB1P53618 953 aaKnown RBP13.5□□□□□ -0.25
HCFC1-202ENST00000369984 TAF11Q15544 211 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 SLC35F6Q8N357 371 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 MAML1Q92585 1016 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 CNOT10Q9H9A5 744 aaKnown RBP13.5□□□□□ -0.25
HCFC1-202ENST00000369984 ARHGEF9O43307 516 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 CMA1P23946 247 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 CLIC6Q96NY7 704 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 FAM193BQ96PV7 902 aaPredicted RBP13.5□□□□□ -0.25
HCFC1-202ENST00000369984 TRIM55Q9BYV6 548 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 UBN1Q9NPG3 1134 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 TOM1L1O75674 476 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 BRD1O95696 1058 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 ANKRD35Q8N283 1001 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 CHURC1Q8WUH1 139 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 DEPDC1BQ8WUY9 529 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 TUBGCP2Q9BSJ2 902 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 DAAM1Q9Y4D1 1078 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 POLR2MP0CAP2 368 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 FAM47CQ5HY64 1035 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 SATB2Q9UPW6 733 aa13.5□□□□□ -0.25
HCFC1-202ENST00000369984 TTI1O43156 1089 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 COBLO75128 1261 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 H2AFZP0C0S5 128 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 CASP14P31944 242 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 H2AFVQ71UI9 128 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 ARMC9Q7Z3E5 817 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 KCTD6Q8NC69 237 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 IP6K1Q92551 441 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 GPKOWQ92917 476 aaPredicted RBP eCLIP13.49□□□□□ -0.25
HCFC1-202ENST00000369984 TUBB6Q9BUF5 446 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 PHLPP2Q6ZVD8 1323 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 GCKRQ14397 625 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 GALNT17Q6IS24 598 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 LARGE2Q8N3Y3 721 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 CEP70Q8NHQ1 597 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 SERPINI1Q99574 410 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 TEKT3Q9BXF9 490 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 TPCN1Q9ULQ1 816 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 KRT26Q7Z3Y9 468 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 DNAAF3Q8N9W5 541 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 CDC23Q9UJX2 597 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 SKIP12755 728 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 MFAP3P55082 362 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 CYP4F22Q6NT55 531 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 ZNF280CQ8ND82 737 aa13.49□□□□□ -0.25
HCFC1-202ENST00000369984 KLHL29Q96CT2 875 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms