RNA–Protein interactions for RNA: ENST00000368930.5

CDC40-202, Transcript of cell division cycle 40, humanhuman

TSL 2 BASIC

Gene CDC40, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-202ENST00000368930 HOXD11P31277 338 aaPredicted RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 SHMT1P34896 483 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 MTIF2P46199 727 aaKnown RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 CLK2P49760 499 aaKnown RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 KLK7P49862 253 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 ZBED6P86452 979 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 MCM6Q14566 821 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 FIGNQ5HY92 759 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 PPP4R3AQ6IN85 833 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 LARP4BQ92615 738 aaKnown RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 NOC4LQ9BVI4 516 aaKnown RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 FUT8Q9BYC5 575 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 RAB34Q9BZG1 259 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 SLC39A2Q9NP94 309 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 USP40Q9NVE5 1235 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 TRIM10Q9UDY6 481 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 ZHX1Q9UKY1 873 aaPredicted RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 RAB21Q9UL25 225 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 GUCA1BQ9UMX6 200 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 GREB1LQ9C091 1923 aaPredicted RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 A0A1W2PQJ5 194 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 F8W031 263 aaPredicted RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 POTEB2H3BUK9 544 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 KRT83P78385 493 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 CDK17Q00537 523 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 ZNF771Q7L3S4 317 aaPredicted RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 HNRNPLLQ8WVV9 542 aaKnown RBP12.41□□□□□ -0.42
CDC40-202ENST00000368930 RAD54LQ92698 747 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 MYO6Q9UM54 1294 aa12.41□□□□□ -0.42
CDC40-202ENST00000368930 MYH7BA7E2Y1 1941 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 MYH4Q9Y623 1939 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 POTEMA6NI47 508 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 NKRFO15226 690 aaKnown RBP eCLIP12.4□□□□□ -0.42
CDC40-202ENST00000368930 TFRCP02786 760 aaKnown RBP12.4□□□□□ -0.42
CDC40-202ENST00000368930 HOXA7P31268 230 aaPredicted RBP12.4□□□□□ -0.42
CDC40-202ENST00000368930 TMEM119Q4V9L6 283 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 CCDC170Q8IYT3 715 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 GUF1Q8N442 669 aaKnown RBP12.4□□□□□ -0.42
CDC40-202ENST00000368930 CDK5RAP3Q96JB5 506 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 NUDT12Q9BQG2 462 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 ZC3H12CQ9C0D7 883 aaKnown RBP12.4□□□□□ -0.42
CDC40-202ENST00000368930 ZNHIT6Q9NWK9 470 aaKnown RBP12.4□□□□□ -0.42
CDC40-202ENST00000368930 AFF2P51816 1311 aa12.4□□□□□ -0.42
CDC40-202ENST00000368930 CTAGE15A4D2H0 777 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 EIF3CLB5ME19 914 aaKnown RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 EHHADHQ08426 723 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 LONRF2Q1L5Z9 754 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 CCDC122Q5T0U0 273 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 FKBP15Q5T1M5 1219 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 KRT79Q5XKE5 535 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 CDC42EP5Q6NZY7 148 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 HHIPL2Q6UWX4 724 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 HAS1Q92839 578 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 IQCDQ96DY2 449 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 MTMR8Q96EF0 704 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 EIF3CQ99613 913 aaKnown RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 MXD3Q9BW11 206 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 LRRC27Q9C0I9 530 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 NHEJ1Q9H9Q4 299 aaPredicted RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 ZBTB5O15062 677 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 CYLC1P35663 651 aaPredicted RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 TNNI2P48788 182 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 MRPL12P52815 198 aaKnown RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 UBE2SQ16763 222 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 VWA3BQ502W6 1294 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 APOBEC3HQ6NTF7 200 aaKnown RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 DYMQ7RTS9 669 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 TRAPPC11Q7Z392 1133 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 KCNK18Q7Z418 384 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 SNX29Q8TEQ0 813 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 CUL5Q93034 780 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 PKNOX2Q96KN3 472 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 PNKPQ96T60 521 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 TRPC5Q9UL62 973 aaPredicted RBP12.39□□□□□ -0.43
CDC40-202ENST00000368930 ABCB11O95342 1321 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 ADAMTSL1Q8N6G6 1762 aa12.39□□□□□ -0.43
CDC40-202ENST00000368930 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 MAP2K7O14733 419 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 HNRNPH3P31942 346 aaKnown RBP12.38□□□□□ -0.43
CDC40-202ENST00000368930 SLC16A2P36021 539 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 SCNN1DP51172 638 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 LRRC63Q05C16 580 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 PSMD2Q13200 908 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 BEND6Q5SZJ8 279 aaPredicted RBP12.38□□□□□ -0.43
CDC40-202ENST00000368930 FOXR2Q6PJQ5 311 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 EHBP1Q8NDI1 1231 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 DDX12PQ92771 950 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 PCMTD1Q96MG8 357 aaPredicted RBP12.38□□□□□ -0.43
CDC40-202ENST00000368930 PSTPIP2Q9H939 334 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 DDX25Q9UHL0 483 aaKnown RBP12.38□□□□□ -0.43
CDC40-202ENST00000368930 TFR2Q9UP52 801 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
CDC40-202ENST00000368930 SIK3Q9Y2K2 1263 aa12.38□□□□□ -0.43
CDC40-202ENST00000368930 ARFGEF1Q9Y6D6 1849 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms