RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 FOXD4L6Q3SYB3 417 aaPredicted RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 GNASQ5JWF2 1037 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 SLFN13Q68D06 897 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 FOXD4L3Q6VB84 417 aaPredicted RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 RAB11FIP4Q86YS3 637 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 VWCEQ96DN2 955 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 PBX4Q9BYU1 374 aa11.55□□□□□ -0.56
TPM3-210ENST00000368530 GNEQ9Y223 722 aaKnown RBP11.55□□□□□ -0.56
TPM3-210ENST00000368530 GRIN2DO15399 1336 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 A0A0U1RQG5 324 aaPredicted RBP11.54□□□□□ -0.56
TPM3-210ENST00000368530 STX6O43752 255 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 JAK2O60674 1132 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 PFKFB2O60825 505 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 FDX1P10109 184 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 BEX3Q00994 111 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 PPARAQ07869 468 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 SCRN1Q12765 414 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 AKNAD1Q5T1N1 836 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 TMEM63BQ5T3F8 832 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 MFSD6Q6ZSS7 791 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 ZNF365Q70YC5 407 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 TIFAQ96CG3 184 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 GMCL1Q96IK5 515 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 AGBL1Q96MI9 1066 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 AGXT2Q9BYV1 514 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 NCOA5Q9HCD5 579 aaKnown RBP11.54□□□□□ -0.56
TPM3-210ENST00000368530 A1CFQ9NQ94 594 aaKnown RBP11.54□□□□□ -0.56
TPM3-210ENST00000368530 IL17RBQ9NRM6 502 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 DDX49Q9Y6V7 483 aaKnown RBP11.54□□□□□ -0.56
TPM3-210ENST00000368530 MROH7Q68CQ1 1323 aa11.54□□□□□ -0.56
TPM3-210ENST00000368530 KLF18A0A0U1RQI7 1052 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 VPS37CA5D8V6 355 aaPredicted RBP11.53□□□□□ -0.56
TPM3-210ENST00000368530 TMEM232C9JQI7 657 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 GOLGA6L22H0YM25 854 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 PLA2G6O60733 806 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 PPFIA3O75145 1194 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 KDM4AO75164 1064 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 ACRP10323 421 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 PDIA3P30101 505 aaKnown RBP11.53□□□□□ -0.56
TPM3-210ENST00000368530 NOVP48745 357 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 TFAP4Q01664 338 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 TNFAIP2Q03169 654 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 PPIGQ13427 754 aaKnown RBP eCLIP11.53□□□□□ -0.564e-7■□□□□ 9.5
TPM3-210ENST00000368530 TAPT1Q6NXT6 567 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 STAG1Q8WVM7 1258 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 PRDM6Q9NQX0 595 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 HOMER2Q9NSB8 354 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 BRPF3Q9ULD4 1205 aa11.53□□□□□ -0.56
TPM3-210ENST00000368530 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
TPM3-210ENST00000368530 GOLGA8BA8MQT2 603 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 TRAK2O60296 914 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 ZSCAN22P10073 491 aaPredicted RBP11.52□□□□□ -0.57
TPM3-210ENST00000368530 CYP2C18P33260 490 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 ADGRE1Q14246 886 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 LARP1BQ659C4 914 aaKnown RBP11.52□□□□□ -0.57
TPM3-210ENST00000368530 CXCL17Q6UXB2 119 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 CLEC17AQ6ZS10 378 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 RASGRP2Q7LDG7 609 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 VTI1AQ96AJ9 217 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 PPP1R12CQ9BZL4 782 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 ACAD9Q9H845 621 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 CNNM2Q9H8M5 875 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 SPC25Q9HBM1 224 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 PDGFCQ9NRA1 345 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 CXXC1Q9P0U4 656 aaPredicted RBP11.52□□□□□ -0.57
TPM3-210ENST00000368530 UMODL1Q5DID0 1318 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 WDR19Q8NEZ3 1342 aa11.52□□□□□ -0.57
TPM3-210ENST00000368530 SH2B2O14492 632 aaPredicted RBP11.51□□□□□ -0.57
TPM3-210ENST00000368530 MCM3APO60318 1980 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 SMPD1P17405 629 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 STAT2P52630 851 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 FOSBP53539 338 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 SNAP25P60880 206 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 MUM1L1Q5H9M0 696 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 TMEM67Q5HYA8 995 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 RCSD1Q6JBY9 416 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 FAM160B2Q86V87 743 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 TMEM199Q8N511 208 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 MORC4Q8TE76 937 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 CHURC1Q8WUH1 139 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 HERVK_113Q902F9 699 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 ZNF274Q96GC6 653 aaPredicted RBP11.51□□□□□ -0.57
TPM3-210ENST00000368530 TRERF1Q96PN7 1200 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
TPM3-210ENST00000368530 ZKSCAN3Q9BRR0 538 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 KRT23Q9C075 422 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 SENP2Q9HC62 589 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 IL23AQ9NPF7 189 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 RNF146Q9NTX7 359 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 CTDP1Q9Y5B0 961 aaPredicted RBP11.51□□□□□ -0.57
TPM3-210ENST00000368530 CHD7Q9P2D1 2997 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 MYH4Q9Y623 1939 aa11.51□□□□□ -0.57
TPM3-210ENST00000368530 PTPDC1A2A3K4 754 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 IFIT3O14879 490 aaKnown RBP11.5□□□□□ -0.57
TPM3-210ENST00000368530 NMT2O60551 498 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 CTDNEP1O95476 244 aa11.5□□□□□ -0.57
TPM3-210ENST00000368530 F13A1P00488 732 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms