RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 SH3TC1Q8TE82 1336 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 MBD4O95243 580 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 TRIM21P19474 475 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 ATP6V1C1P21283 382 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 FUT4P22083 530 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 GBP1P32455 592 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 SERPINB4P48594 390 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 BPIFB4P59827 614 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 RNASELQ05823 741 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 DEUP1Q05D60 604 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 RASA3Q14644 834 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 UAP1Q16222 522 aaPredicted RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 KANK3Q6NY19 840 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 ZNF572Q7Z3I7 529 aaPredicted RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 CCDC42Q96M95 316 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 DNAJC7Q99615 494 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 DDX23Q9BUQ8 820 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 MTFR1LQ9H019 292 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.25□□□□□ -0.93
CD46-209ENST00000367047 VPS54Q9P1Q0 977 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 PNMA2Q9UL42 364 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 PHF8Q9UPP1 1060 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 USH1CQ9Y6N9 552 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 H0YGN5 161 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 CHN1P15882 459 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 EIF4BP23588 611 aaKnown RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 INHBCP55103 352 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 IDI1Q13907 227 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 TRIM29Q14134 588 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 ITIH4Q14624 930 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 SFMBT2Q5VUG0 894 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 LRIG3Q6UXM1 1119 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 RINLQ6ZS11 566 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 CEP128Q6ZU80 1094 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 LCA5Q86VQ0 697 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 CCNJLQ8IV13 435 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 RNF10Q8N5U6 811 aaKnown RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 LINS1Q8NG48 757 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 EEF2KMTQ96G04 330 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 IFIH1Q9BYX4 1025 aaKnown RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 FAM129AQ9BZQ8 928 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 CWC25Q9NXE8 425 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 SCOCQ9UIL1 159 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 PNMA3Q9UL41 463 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 NFS1Q9Y697 457 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 NUTM2BA6NNL0 878 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 NUTM2EB1AL46 878 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 UBE2Q2LH0YL09 131 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 ABLIM1O14639 778 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 PRC1O43663 620 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 PLEKP08567 350 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 USP46P62068 366 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 CWF19L2Q2TBE0 894 aaKnown RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 OR52E8Q6IFG1 317 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 MIGA2Q7L4E1 593 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 PIGWQ7Z7B1 504 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 APLFQ8IW19 511 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 IFT74Q96LB3 600 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 ZNF317Q96PQ6 595 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 PURBQ96QR8 312 aaKnown RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 LRRC4CQ9HCJ2 640 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 DMAP1Q9NPF5 467 aaPredicted RBP9.24□□□□□ -0.93
CD46-209ENST00000367047 KIF1BO60333 1816 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 AFF2P51816 1311 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 WDR17Q8IZU2 1322 aa9.24□□□□□ -0.93
CD46-209ENST00000367047 ZNF263O14978 683 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 CETN3O15182 167 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 BUB1O43683 1085 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 PRLRP16471 622 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 PEX5P50542 639 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 COPS2P61201 443 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 SPAG1Q07617 926 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 SAFBQ15424 915 aaKnown RBP eCLIP9.23□□□□□ -0.936e-6■□□□□ 10.7
CD46-209ENST00000367047 BICDL1Q6ZP65 573 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 FAM47EQ6ZV65 393 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 APBB1IPQ7Z5R6 666 aaPredicted RBP9.23□□□□□ -0.93
CD46-209ENST00000367047 MB21D1Q8N884 522 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 SPATA20Q8TB22 786 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 GBP5Q96PP8 586 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 UBAC1Q9BSL1 405 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 BLZF1Q9H2G9 400 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 CHPF2Q9P2E5 772 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 FBXL5Q9UKA1 691 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 CAPN11Q9UMQ6 739 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 CRYBG1Q9Y4K1 1723 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 TLDC2A0PJX2 215 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 SMIM23A6NLE4 172 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 ASAP2O43150 1006 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 RAD51CO43502 376 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 ZNF24P17028 368 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 PTPREP23469 700 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 RASSF7Q02833 373 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 SETDB1Q15047 1291 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 TSNAXIP1Q2TAA8 658 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 MUM1Q2TAK8 710 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 TCERG1LQ5VWI1 586 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 RNF168Q8IYW5 571 aaPredicted RBP9.23□□□□□ -0.93
CD46-209ENST00000367047 DNAJC9Q8WXX5 260 aa9.23□□□□□ -0.93
CD46-209ENST00000367047 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms