RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 BRINP1O60477 761 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 TBC1D8O95759 1140 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 CKMP06732 381 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 BPIP17213 487 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 CEBPAP49715 358 aaPredicted RBP5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 PRKCQQ04759 706 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 EGR3Q06889 387 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 RSPO4Q2I0M5 234 aaPredicted RBP5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 BRDTQ58F21 947 aaPredicted RBP5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 PIK3R6Q5UE93 754 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 TMEM52Q8NDY8 209 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 ASB11Q8WXH4 323 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 FCRL2Q96LA5 508 aaPredicted RBP5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 CELF4Q9BZC1 486 aaKnown RBP5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 ERVK13-1Q9NX77 482 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 VAV3Q9UKW4 847 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 WASHC2CQ9Y4E1 1318 aa5.18□□□□□ -1.58
RNU6-28P-201ENST00000362378 CBX4O00257 560 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 MSTNO14793 375 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 ZEB2O60315 1214 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 MARCH6O60337 910 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 GLRX3O76003 335 aaKnown RBP5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 S100BP04271 92 aaPredicted RBP5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 GTF2A2P52657 109 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 RBM10P98175 930 aaKnown RBP5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 STRN3Q13033 797 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 LSAMPQ13449 338 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 RNF219Q5W0B1 726 aaPredicted RBP5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 ZPBP2Q6X784 338 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 NECAB2Q7Z6G3 386 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 CPNE8Q86YQ8 564 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 ZC3H7AQ8IWR0 971 aaKnown RBP5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 IGSF22Q8N9C0 903 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 OR2W6PQ8NHA6 318 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 MISP3Q96FF7 219 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 HRASLS5Q96KN8 279 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 CDIP1Q9H305 208 aa5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 TIMM13Q9Y5L4 95 aaPredicted RBP5.17□□□□□ -1.58
RNU6-28P-201ENST00000362378 C7orf72A4D263 438 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 GPR39O43194 453 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 DYRK3O43781 588 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 MYO1BO43795 1136 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 F2P00734 622 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 PROCP04070 461 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 SOD2P04179 222 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 RPL10P27635 214 aaKnown RBP5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 SCNN1BP51168 640 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 MECP2P51608 486 aaKnown RBP5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 LAPTM5Q13571 262 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 STAT4Q14765 748 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 AOC3Q16853 763 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 HLA-DQA1Q5Y7H0 255 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 WAPLQ7Z5K2 1190 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 Q8N1Y9 231 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 NAT16Q8N8M0 369 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 WDR66Q8TBY9 1149 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 CEP89Q96ST8 783 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 TTC1Q99614 292 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 G6PC3Q9BUM1 346 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 IFT22Q9H7X7 185 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 IPPKQ9H8X2 491 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 LMCD1Q9NZU5 365 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 TNFRSF10DQ9UBN6 386 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 ADGRE2Q9UHX3 823 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 PCDHA2Q9Y5H9 948 aa5.16□□□□□ -1.58
RNU6-28P-201ENST00000362378 FAM47E-STBD1D6RA91 191 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 H7BY64 318 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 M0R2C6 588 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 TRAF5O00463 557 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 NEMP1O14524 444 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 GSTA4O15217 222 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 NPHS1O60500 1241 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 PARNO95453 639 aaKnown RBP5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 SRGAP2CP0DJJ0 459 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 GRK2P25098 689 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 HOXA10P31260 410 aaPredicted RBP5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 GRK3P35626 688 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 GUCY2FP51841 1108 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 RPL11P62913 178 aaKnown RBP5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 DSG1Q02413 1049 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 MSMPQ1L6U9 139 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 TMEM177Q53S58 311 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 FAM47CQ5HY64 1035 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 LHFPL2Q6ZUX7 228 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 C16orf59Q7L2K0 433 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 OVCH1Q7RTY7 1134 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 NLGN2Q8NFZ4 835 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 PI4K2BQ8TCG2 481 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 LINC01599Q8WXQ3 324 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 DPF3Q92784 378 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 USP7Q93009 1102 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 FBXW5Q969U6 566 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 PPARGC1AQ9UBK2 798 aaKnown RBP5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 B4GALT6Q9UBX8 382 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 COQ6Q9Y2Z9 468 aa5.15□□□□□ -1.59
RNU6-28P-201ENST00000362378 CCDC66A2RUB6 948 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 FADS2P1A8MWK0 482 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 BCL6P41182 706 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms