RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 SEC16BQ96JE7 1060 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 NOC4LQ9BVI4 516 aaKnown RBP14.02□□□□□ -0.17
VAMP1-201ENST00000361716 OSBPL7Q9BZF2 842 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 NOD2Q9HC29 1040 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 ABCC6O95255 1503 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 FAM208AQ9UK61 1670 aaKnown RBP14.02□□□□□ -0.17
VAMP1-201ENST00000361716 WTIPA6NIX2 430 aaPredicted RBP14.02□□□□□ -0.17
VAMP1-201ENST00000361716 DIAPH2O60879 1101 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 RASSF9O75901 435 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 VIMP08670 466 aaKnown RBP14.02□□□□□ -0.17
VAMP1-201ENST00000361716 ASIC1P78348 528 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 CACNA2D4Q7Z3S7 1137 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 CCDC50Q8IVM0 306 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 CCDC63Q8NA47 563 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
VAMP1-201ENST00000361716 SAAL1Q96ER3 474 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.17
VAMP1-201ENST00000361716 IGHMBP2P38935 993 aaKnown RBP14.01□□□□□ -0.17
VAMP1-201ENST00000361716 EHHADHQ08426 723 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 THEMIS2Q5TEJ8 643 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 CAPRIN2Q6IMN6 1127 aaKnown RBP14.01□□□□□ -0.17
VAMP1-201ENST00000361716 RRAGAQ7L523 313 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 ARFGAP2Q8N6H7 521 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 TUBGCP2Q9BSJ2 902 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 RNF41Q9H4P4 317 aaPredicted RBP14.01□□□□□ -0.17
VAMP1-201ENST00000361716 MEGF6O75095 1541 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 UQCRFS1P1P0C7P4 283 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 CTSWP56202 376 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 IRX1P78414 480 aaPredicted RBP14.01□□□□□ -0.17
VAMP1-201ENST00000361716 SKOR1P84550 965 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 KDM7AQ6ZMT4 941 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 FAM228AQ86W67 206 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 CCDC170Q8IYT3 715 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 LMBR1Q8WVP7 490 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 NGLY1Q96IV0 654 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 NLRC4Q9NPP4 1024 aa14.01□□□□□ -0.17
VAMP1-201ENST00000361716 MAGEB6P1A0A0J9YX57 407 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 A6NNZ2 444 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 USP17L12C9JPN9 530 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 USP17L21D6R901 530 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 CIAO1O76071 339 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 VEGFAP15692 232 aaPredicted RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 EIF4A3P38919 411 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 PMS1P54277 932 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 TUBB8Q3ZCM7 444 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 CFAP221Q4G0U5 840 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 ZBTB38Q8NAP3 1195 aaPredicted RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 GSG1L2A8MUP6 293 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 RPN1P04843 607 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 NT5DC1Q5TFE4 455 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 DZIP3Q86Y13 1208 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 FOXP1Q9H334 677 aaPredicted RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 ACTR5Q9H9F9 607 aaPredicted RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 A1CFQ9NQ94 594 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 LIMA1Q9UHB6 759 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 LEMD3Q9Y2U8 911 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 PCDHA13Q9Y5I0 950 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 HEG1Q9ULI3 1381 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 TMCO5BA8MYB1 307 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 IRF6O14896 467 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 GOLGA8HP0CJ92 632 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 MAGOHP61326 146 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 PUM3Q15397 648 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 ANKRD20A8PQ5CZ79 823 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 SMIM5Q71RC9 77 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 DYMQ7RTS9 669 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 MAGOHBQ96A72 148 aaKnown RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 AATFQ9NY61 560 aaKnown RBP eCLIP14□□□□□ -0.17
VAMP1-201ENST00000361716 ZBTB1Q9Y2K1 713 aa14□□□□□ -0.17
VAMP1-201ENST00000361716 KDM6AO15550 1401 aaPredicted RBP14□□□□□ -0.17
VAMP1-201ENST00000361716 CPDO75976 1380 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 ANP32DO95626 131 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 EVX2Q03828 476 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 LRP10Q7Z4F1 713 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 RWDD2AQ9UIY3 292 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 PSMA7O14818 248 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 CTNND1O60716 968 aaKnown RBP13.99□□□□□ -0.17
VAMP1-201ENST00000361716 TCP1P17987 556 aaKnown RBP13.99□□□□□ -0.17
VAMP1-201ENST00000361716 SPAG5Q96R06 1193 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 ZCWPW1Q9H0M4 648 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 DPH5Q9H2P9 285 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 EXOC1Q9NV70 894 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 RBM28Q9NW13 759 aaKnown RBP13.99□□□□□ -0.17
VAMP1-201ENST00000361716 ITIH6Q6UXX5 1313 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 IL2RBP14784 551 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 INF2Q27J81 1249 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 LETM2Q2VYF4 491 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 FNBP4Q8N3X1 1017 aaPredicted RBP13.99□□□□□ -0.17
VAMP1-201ENST00000361716 MMGT1Q8N4V1 131 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 TBC1D22AQ8WUA7 517 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 LPIN2Q92539 896 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 TAF4BQ92750 862 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 CCDC47Q96A33 483 aaKnown RBP13.99□□□□□ -0.17
VAMP1-201ENST00000361716 AP1M1Q9BXS5 423 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 GOLPH3Q9H4A6 298 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 KANSL2Q9H9L4 492 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 G3BP2Q9UN86 482 aaKnown RBP13.99□□□□□ -0.17
VAMP1-201ENST00000361716 COL18A1P39060 1754 aa13.99□□□□□ -0.17
VAMP1-201ENST00000361716 LGR5O75473 907 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms