RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 ATP6V1G2O95670 118 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 SEPT7Q16181 437 aaKnown RBP9.99□□□□□ -0.81
CALD1-201ENST00000361675 TNS3Q68CZ2 1445 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 PEX5LQ8IYB4 626 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 TRMT44Q8IYL2 757 aaKnown RBP9.99□□□□□ -0.81
CALD1-201ENST00000361675 ZFPM2Q8WW38 1151 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 RRP36Q96EU6 259 aaKnown RBP9.99□□□□□ -0.81
CALD1-201ENST00000361675 SPACA7Q96KW9 195 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 SLF1Q9BQI6 1058 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 KMT5AQ9NQR1 393 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 GINM1Q9NU53 330 aa9.99□□□□□ -0.81
CALD1-201ENST00000361675 RASSF9O75901 435 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 MTA2O94776 668 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 PRPF6O94906 941 aaKnown RBP9.98□□□□□ -0.81
CALD1-201ENST00000361675 PSMC4P43686 418 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 CCDC57Q2TAC2 916 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 CAPN12Q6ZSI9 719 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 EPSTI1Q96J88 318 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 RNPC3Q96LT9 517 aaKnown RBP9.98□□□□□ -0.81
CALD1-201ENST00000361675 MYD88Q99836 296 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 NDUFB9Q9Y6M9 179 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 LUC7L3O95232 432 aaKnown RBP9.98□□□□□ -0.81
CALD1-201ENST00000361675 MYCP01106 439 aaPredicted RBP9.98□□□□□ -0.81
CALD1-201ENST00000361675 MYL5Q02045 173 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 HLTFQ14527 1009 aaKnown RBP eCLIP9.98□□□□□ -0.814e-6■■□□□ 14.4
CALD1-201ENST00000361675 GSDMBQ8TAX9 411 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 EAF2Q96CJ1 260 aaPredicted RBP9.98□□□□□ -0.81
CALD1-201ENST00000361675 BRD8Q9H0E9 1235 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 CCDC8Q9H0W5 538 aaPredicted RBP9.98□□□□□ -0.81
CALD1-201ENST00000361675 FAM114A2Q9NRY5 505 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 RAB21Q9UL25 225 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 SLC45A1Q9Y2W3 748 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 SCN11AQ9UI33 1791 aa9.98□□□□□ -0.81
CALD1-201ENST00000361675 GRM8O00222 908 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 NDUFB5O43674 189 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 INMTO95050 263 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 PTK7Q13308 1070 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 FAM47EQ6ZV65 393 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 IFNL2Q8IZJ0 200 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 MSANTD4Q8NCY6 345 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.97□□□□□ -0.812e-7■□□□□ 11.1
CALD1-201ENST00000361675 DLGAP2Q9P1A6 1054 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 DMGDHQ9UI17 866 aaKnown RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 MAPK8IP1Q9UQF2 711 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 MAGED1Q9Y5V3 778 aaPredicted RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 KDM4FA0A1W2PPD8 638 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 NR1D1P20393 614 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 MARCKSP29966 332 aaPredicted RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 C2orf54Q08AI8 447 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 RIC3Q7Z5B4 369 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 FAM228AQ86W67 206 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 EDC3Q96F86 508 aaKnown RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 GPR101Q96P66 508 aaPredicted RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 PAIP2BQ9ULR5 123 aaKnown RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 NEURL1BA8MQ27 555 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 NBPF26B4DH59 902 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 EIF3FO00303 357 aaPredicted RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 PPP1R37O75864 691 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 SCTRP47872 440 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 CCDC38Q502W7 563 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 NBPF14Q5TI25 921 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 CNTROBQ8N137 903 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 NBPF15Q8N660 670 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 TNIP2Q8NFZ5 429 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 LINS1Q8NG48 757 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 MYCBPAPQ8TBZ2 947 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 MAIP1Q8WWC4 291 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 KIFC2Q96AC6 838 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 FGD4Q96M96 766 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 CCDC113Q9H0I3 377 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 RPAP3Q9H6T3 665 aaPredicted RBP9.97□□□□□ -0.81
CALD1-201ENST00000361675 FAM184BQ9ULE4 1060 aa9.97□□□□□ -0.81
CALD1-201ENST00000361675 ARPC4-TTLL3A0A0A6YYG9 625 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 SPTLC2O15270 562 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 STX10O60499 249 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 SMNDC1O75940 238 aaKnown RBP eCLIP9.96□□□□□ -0.81
CALD1-201ENST00000361675 FESP07332 822 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 PTH1RQ03431 593 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 KRT72Q14CN4 511 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 ZNF365Q70YC5 407 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 RUFY2Q8WXA3 655 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 CLIP3Q96DZ5 547 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 CCDC43Q96MW1 224 aaKnown RBP9.96□□□□□ -0.81
CALD1-201ENST00000361675 EPN3Q9H201 632 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 PREBQ9HCU5 417 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 CHMP2BQ9UQN3 213 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 OVOS2A0A0G2JMS6 1433 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 DPPA5A6NC42 116 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 RBP3P10745 1247 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 COL19A1Q14993 1142 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 WTAPQ15007 396 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 GKAP1Q5VSY0 366 aaPredicted RBP9.96□□□□□ -0.81
CALD1-201ENST00000361675 TMEM154Q6P9G4 183 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 RBM17Q96I25 401 aaKnown RBP9.96□□□□□ -0.81
CALD1-201ENST00000361675 GBP5Q96PP8 586 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 NUP88Q99567 741 aaPredicted RBP9.96□□□□□ -0.81
CALD1-201ENST00000361675 SPC25Q9HBM1 224 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 CORO1CQ9ULV4 474 aaPredicted RBP9.96□□□□□ -0.81
CALD1-201ENST00000361675 SSX2IPQ9Y2D8 614 aa9.96□□□□□ -0.81
CALD1-201ENST00000361675 SPDYE5A6NIY4 337 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms