RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SPDL1Q96EA4 605 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.51□□□□□ -0.73
CUX1-203ENST00000360264 H2AFZP0C0S5 128 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 IL13P35225 146 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 EXOC3L4Q17RC7 722 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 KIAA1841Q6NSI8 718 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 H2AFVQ71UI9 128 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 MGARPQ8TDB4 240 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 LRMPQ12912 555 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 ARL4AP40617 200 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 GIMAP8Q8ND71 665 aaPredicted RBP10.51□□□□□ -0.73
CUX1-203ENST00000360264 ZNF654Q8IZM8 581 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 PAGR1Q9BTK6 254 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 IRAK4Q9NWZ3 460 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 ACTN1P12814 892 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 STAT2P52630 851 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 CFAP61Q8NHU2 1237 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 PDZD8Q8NEN9 1154 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 SLC38A10Q9HBR0 1119 aa10.51□□□□□ -0.73
CUX1-203ENST00000360264 CPP00450 1065 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 SERPINB6P35237 376 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 ABCB5Q2M3G0 1257 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 FAF1Q9UNN5 650 aaPredicted RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 TRIM35Q9UPQ4 493 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 AKT3Q9Y243 479 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 ZBTB7BO15156 539 aaPredicted RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 SCG2P13521 617 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 BTDP43251 543 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 ZNF274Q96GC6 653 aaPredicted RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 PAMP19021 973 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 FBXO41Q8TF61 875 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 WDR11Q9BZH6 1224 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 ART3Q13508 389 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 MICAL1Q8TDZ2 1067 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 NT5C1BQ96P26 610 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 SLF1Q9BQI6 1058 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 PCDHB4Q9Y5E5 795 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 HNRNPCL2B2RXH8 293 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 HNRNPCL1O60812 293 aaKnown RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 IGBP1P78318 339 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 LRRC37BQ96QE4 947 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 TTLL1O95922 423 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 TECP42680 631 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 PLA2G4DQ86XP0 818 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 GSDMAQ96QA5 445 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 SEPT9Q9UHD8 586 aaPredicted RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 CCND2P30279 289 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 ADAM9Q13443 819 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 CIAO1O76071 339 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 TMCC1O94876 653 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 CDC37Q16543 378 aaPredicted RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 FGD4Q96M96 766 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 BLZF1Q9H2G9 400 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 KCNJ14Q9UNX9 436 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 MAP3K19Q56UN5 1328 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 IFRD2Q12894 506 aaPredicted RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 PDE1CQ14123 709 aaPredicted RBP10.5□□□□□ -0.73
CUX1-203ENST00000360264 TRIM4Q9C037 500 aa10.5□□□□□ -0.73
CUX1-203ENST00000360264 EFCAB8A8MWE9 144 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 PSAPP07602 524 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 TTC39CQ8N584 583 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 ZBTB38Q8NAP3 1195 aaPredicted RBP10.49□□□□□ -0.73
CUX1-203ENST00000360264 MYRIPQ8NFW9 859 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 ZNF577Q9BSK1 485 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 KCNK3O14649 394 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 STAG1Q8WVM7 1258 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 DHX36Q9H2U1 1008 aaKnown RBP10.49□□□□□ -0.73
CUX1-203ENST00000360264 GPR162Q16538 588 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 DBNDD2Q9BQY9 259 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 STK38LQ9Y2H1 464 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 IREB2P48200 963 aaKnown RBP10.49□□□□□ -0.73
CUX1-203ENST00000360264 KCTD6Q8NC69 237 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 TXLNGQ9NUQ3 528 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 GNGT2O14610 69 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 BAG2O95816 211 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 PSMD2Q13200 908 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 SPDYE2BA6NHP3 402 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 SPDYE6P0CI01 402 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 RSBN1LQ6PCB5 846 aaPredicted RBP10.49□□□□□ -0.73
CUX1-203ENST00000360264 CCDC197Q8NCU1 140 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 NUDCD1Q96RS6 583 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 KANSL2Q9H9L4 492 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 LRFN2Q9ULH4 789 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 CHEK2O96017 543 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 RPN1P04843 607 aaKnown RBP10.49□□□□□ -0.73
CUX1-203ENST00000360264 EEF1GP26641 437 aaKnown RBP10.49□□□□□ -0.73
CUX1-203ENST00000360264 UBN1Q9NPG3 1134 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 SNX14Q9Y5W7 946 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 SGK1O00141 431 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 SPATA1Q5VX52 437 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 TTBK2Q6IQ55 1244 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.49□□□□□ -0.737e-7■■□□□ 13.1
CUX1-203ENST00000360264 XDHP47989 1333 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 PGBD1Q96JS3 809 aa10.49□□□□□ -0.73
CUX1-203ENST00000360264 VPS39Q96JC1 886 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 AMNQ9BXJ7 453 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 SCHIP1Q9P0W5 487 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms