RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 SOS1Q07889 1333 aaPredicted RBP18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 TMEM191BP0C7N4 346 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 CERS3Q8IU89 383 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 NAF1Q96HR8 494 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 MLXIPQ9HAP2 919 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 KCTD6Q8NC69 237 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 VPS54Q9P1Q0 977 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 CHEK2O96017 543 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 CCDC51Q96ER9 411 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 TECP42680 631 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 CTDSPL2Q05D32 466 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 CCDC15Q0P6D6 951 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 CYP4F22Q6NT55 531 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 TAGAPQ8N103 731 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 OTULINQ96BN8 352 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 SLC5A4Q9NY91 659 aa18.74■□□□□ 0.59
CACNA1A-201ENST00000360228 TLR3O15455 904 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 HSPD1P10809 573 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 APLFQ8IW19 511 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 MYOCDQ8IZQ8 938 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 SLC38A10Q9HBR0 1119 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 INPP5FQ9Y2H2 1132 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 ATP8A1Q9Y2Q0 1164 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 RRP15Q9Y3B9 282 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 ALDH1L1O75891 902 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 EHHADHQ08426 723 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 MYL10Q9BUA6 226 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 HOXA7P31268 230 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 TTLL11Q8NHH1 800 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 NUDCD1Q96RS6 583 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 POLR2FP61218 127 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 MCF2L2Q86YR7 1114 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 TEX9Q8N6V9 391 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 EPAS1Q99814 870 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 RASSF7Q02833 373 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 MECOMQ03112 1051 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 NFATC2IPQ8NCF5 419 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 TRPV6Q9H1D0 765 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 SMYD3Q9H7B4 428 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 KCNJ14Q9UNX9 436 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 KRT14P02533 472 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 SERPINB10P48595 397 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 MESDQ14696 234 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 FAM178BQ8IXR5 827 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 ARHGAP45Q92619 1136 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 ZSCAN9O15535 394 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 DYNLT1P63172 113 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 EXT2Q93063 718 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 USP26Q9BXU7 913 aa18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 ARMCX3Q9UH62 379 aaPredicted RBP18.73■□□□□ 0.59
CACNA1A-201ENST00000360228 GPAA1O43292 621 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 DIS3L2Q8IYB7 885 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 TRIML1Q8N9V2 468 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 HIPK4Q8NE63 616 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 MAGOHBQ96A72 148 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 PAGR1Q9BTK6 254 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 CTNND1O60716 968 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 HDAC4P56524 1084 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 PRG4Q92954 1404 aaPredicted RBP18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 CCDC90BQ9GZT6 254 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 G3BP2Q9UN86 482 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 NBNO60934 754 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 B4GALNT2Q8NHY0 566 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 ARHGEF1Q92888 912 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 APOL6Q9BWW8 343 aa18.72■□□□□ 0.59
CACNA1A-201ENST00000360228 LRRIQ4A6NIV6 560 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 TCP11X2Q5H9J9 407 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 SUGCTQ9HAC7 445 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 PLS3P13797 630 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 PSMC1P62191 440 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 GNPTABQ3T906 1256 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 SGO2Q562F6 1265 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 CNBD1Q8NA66 436 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 CCDC127Q96BQ5 260 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 SLC12A6Q9UHW9 1150 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 JRKLQ9Y4A0 524 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 L3MBTL1Q9Y468 752 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 CHCHD3Q9NX63 227 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 TADA3O75528 432 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 PDHA1P08559 390 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 TCIRG1Q13488 830 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 ABI1Q8IZP0 508 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 DDX28Q9NUL7 540 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 STMN3Q9NZ72 180 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 STX18Q9P2W9 335 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 PPP2R2CQ9Y2T4 447 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 ZNF263O14978 683 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 RANBP1P43487 201 aa18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 SRRM1Q8IYB3 904 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 DDX25Q9UHL0 483 aaKnown RBP18.71■□□□□ 0.59
CACNA1A-201ENST00000360228 ESRRBO95718 433 aa18.7■□□□□ 0.58
CACNA1A-201ENST00000360228 ESRRAP11474 423 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-201ENST00000360228 SLFN12Q8IYM2 578 aa18.7■□□□□ 0.58
CACNA1A-201ENST00000360228 GRIN1Q05586 938 aa18.7■□□□□ 0.58
CACNA1A-201ENST00000360228 TTC30AQ86WT1 665 aa18.7■□□□□ 0.58
CACNA1A-201ENST00000360228 ZNF229Q9UJW7 825 aa18.7■□□□□ 0.58
CACNA1A-201ENST00000360228 SPAG7O75391 227 aa18.7■□□□□ 0.58
CACNA1A-201ENST00000360228 FLCNQ8NFG4 579 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms