RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 CDC26Q8NHZ8 85 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 KRT14P02533 472 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 ITGA6P23229 1130 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 SLFNL1Q499Z3 407 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 HABP4Q5JVS0 413 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 PPM1KQ8N3J5 372 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 SAAL1Q96ER3 474 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 C1orf112Q9NSG2 853 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 MYL7Q01449 175 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 CPXCR1Q8N123 301 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 DEPTORQ8TB45 409 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 LRRC59Q96AG4 307 aaKnown RBP11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 TRPV6Q9H1D0 765 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 SFMBT1Q9UHJ3 866 aa11.98□□□□□ -0.49
GTF3C1-201ENST00000356183 GTPBP10A4D1E9 387 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 PFDN6O15212 129 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 TRIM42Q8IWZ5 723 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 NOP53Q9NZM5 478 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 SYCE1LA8MT33 242 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 TUBB6Q9BUF5 446 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 TRIM15Q9C019 465 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 ZNF277Q9NRM2 450 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 SMCO2A6NFE2 343 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 KDM1AO60341 852 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 ACTN1P12814 892 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 COPB1P53618 953 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 SGO2Q562F6 1265 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 KIAA2013Q8IYS2 634 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 EEF2KMTQ96G04 330 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 PARD6BQ9BYG5 372 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 PALD1Q9ULE6 856 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 SERPINI2O75830 405 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 EIF4A2Q14240 407 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 KIF19Q2TAC6 998 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 LINS1Q8NG48 757 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 SERPINI1Q99574 410 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 HAUS4Q9H6D7 363 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 GJA3Q9Y6H8 435 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 MORC2Q9Y6X9 1032 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 PPIP5K1Q6PFW1 1433 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 SOWAHDA6NJG2 315 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 HMGB1P1B2RPK0 211 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 MAPK13O15264 365 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 TNNC2P02585 160 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 KITP10721 976 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 NR1D1P20393 614 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 CCDC85BQ15834 202 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 NBPF10Q6P3W6 841 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 FAM186BQ8IYM0 893 aa11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 ENOX1Q8TC92 643 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 RBM17Q96I25 401 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 CNOT6LQ96LI5 555 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 ELAC2Q9BQ52 826 aaKnown RBP11.97□□□□□ -0.49
GTF3C1-201ENST00000356183 DUOX2Q9NRD8 1548 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 FTCDO95954 541 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 TCP10Q12799 353 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 PUM3Q15397 648 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 G2E3Q7L622 706 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 TRMT2AQ8IZ69 625 aaKnown RBP11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 PGBD1Q96JS3 809 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 PCDHB4Q9Y5E5 795 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 TMOD1P28289 359 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 APPBP2Q92624 585 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 DAAM1Q9Y4D1 1078 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 KDM5BQ9UGL1 1544 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 TAF5LO75529 589 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 MT-ND3P03897 115 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 NEK2P51955 445 aa11.96□□□□□ -0.49
GTF3C1-201ENST00000356183 HNRNPCP07910 306 aaKnown RBP eCLIP11.96□□□□□ -0.57e-6■□□□□ 10.8
GTF3C1-201ENST00000356183 PDZD4Q76G19 769 aaPredicted RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 DISC1Q9NRI5 854 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 DNAJC17Q9NVM6 304 aaKnown RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 WARS2Q9UGM6 360 aaKnown RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 GAS7O60861 476 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 HLA-DPA1P20036 260 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 RWDD2BP57060 319 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 DHX9Q08211 1270 aaKnown RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 AP1M1Q9BXS5 423 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 CNOT10Q9H9A5 744 aaKnown RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 TFCP2L1Q9NZI6 479 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 DENND4BO75064 1496 aaPredicted RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 MAP3K5Q99683 1374 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 SPATA31E1Q6ZUB1 1445 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 RBM6P78332 1123 aaKnown RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 ACTN3Q08043 901 aaPredicted RBP11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 ANGPTL8Q6UXH0 198 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 ACRBPQ8NEB7 543 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 NT5C3AQ9H0P0 336 aa11.96□□□□□ -0.5
GTF3C1-201ENST00000356183 ZFYVE9O95405 1425 aa11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 M0QZ92 97 aa11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 UFL1O94874 794 aa11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 YWHAHQ04917 246 aaPredicted RBP11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 RINLQ6ZS11 566 aa11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 PARD3BQ8TEW8 1205 aa11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 SYMPKQ92797 1274 aaKnown RBP11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 LZTS1Q9Y250 596 aa11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 ATP10BO94823 1461 aa11.95□□□□□ -0.5
GTF3C1-201ENST00000356183 ADGRL2O95490 1459 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms