RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 ERCC3P19447 782 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 KIF5BP33176 963 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 STAT3P40763 770 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 GNAQP50148 359 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 PLS1Q14651 629 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 SNRNP48Q6IEG0 339 aaKnown RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 TTBK2Q6IQ55 1244 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 NFXL1Q6ZNB6 911 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 CHST3Q7LGC8 479 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 RETREG3Q86VR2 466 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 FBXL16Q8N461 479 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 CHST13Q8NET6 341 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 CTCFLQ8NI51 663 aaPredicted RBP4.62□□□□□ -1.67
CNOT4-202ENST00000356162 RAET1EQ8TD07 263 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 USP6NLQ92738 828 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 ARMC5Q96C12 935 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 NUDT12Q9BQG2 462 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 LZTS2Q9BRK4 669 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 MAF1Q9H063 256 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 SENP2Q9HC62 589 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 GABRQQ9UN88 632 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 ZNF536O15090 1300 aa4.62□□□□□ -1.67
CNOT4-202ENST00000356162 STRNO43815 780 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 PEX10O60683 326 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 HOXC6P09630 235 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 XRCC5P13010 732 aaKnown RBP4.61□□□□□ -1.67
CNOT4-202ENST00000356162 NDUFV2P19404 249 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 CASTP20810 708 aaKnown RBP4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SMARCA1P28370 1054 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 FLT3LGP49771 235 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 TROAPQ12815 778 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 CDC37Q16543 378 aaPredicted RBP4.61□□□□□ -1.67
CNOT4-202ENST00000356162 WDR78Q5VTH9 848 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SYNE3Q6ZMZ3 975 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 NCAPG2Q86XI2 1143 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 MTMR8Q96EF0 704 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 MMP19Q99542 508 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SPZ1Q9BXG8 430 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 AGXT2Q9BYV1 514 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 ACAD9Q9H845 621 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SLC24A3Q9HC58 644 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 RAVER2Q9HCJ3 691 aaKnown RBP4.61□□□□□ -1.67
CNOT4-202ENST00000356162 RNF146Q9NTX7 359 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 RBM28Q9NW13 759 aaKnown RBP4.61□□□□□ -1.67
CNOT4-202ENST00000356162 MAD2L2Q9UI95 211 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 GJD2Q9UKL4 321 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 CCPG1Q9ULG6 757 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SLC12A7Q9Y666 1083 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 CYP46A1Q9Y6A2 500 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 PFASO15067 1338 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 ABCB11O95342 1321 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 GOLGA8AA7E2F4 631 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 GOLGA8BA8MQT2 603 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 ADCY3O60266 1144 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 HMGCRP04035 888 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 GOLGA8HP0CJ92 632 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 FCER1AP12319 257 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 JUNDP17535 347 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 GRK4P32298 578 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SLC16A2P36021 539 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 UBXN2AP68543 259 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 TRAF1Q13077 416 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 COL9A3Q14050 684 aaPredicted RBP4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SLC9C1Q4G0N8 1177 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 CCDC174Q6PII3 467 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 APOA5Q6Q788 366 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 RUFY3Q7L099 469 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 ABHD8Q96I13 439 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 LRRC2Q9BYS8 371 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 SLC5A4Q9NY91 659 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 CNTNAP5Q8WYK1 1306 aa4.61□□□□□ -1.67
CNOT4-202ENST00000356162 KLF18A0A0U1RQI7 1052 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 KLRF2D3W0D1 207 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 ZBTB24O43167 697 aaPredicted RBP4.6□□□□□ -1.67
CNOT4-202ENST00000356162 ZBTB43O43298 467 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 DGAT1O75907 488 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 ADORA2AP29274 412 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 FGD1P98174 961 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 PDE4DQ08499 809 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 FOXC1Q12948 553 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 KCTD2Q14681 263 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 RTN1Q16799 776 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 QRICH1Q2TAL8 776 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 OLFML2BQ68BL8 750 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 Q6ZUG5 572 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 TMTC3Q6ZXV5 915 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 MICU3Q86XE3 530 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 ADGRF4Q8IZF3 695 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 CPXCR1Q8N123 301 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 STAG2Q8N3U4 1231 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 NUP133Q8WUM0 1156 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 CHMP4CQ96CF2 233 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 ZNF333Q96JL9 665 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 TCEANC2Q96MN5 208 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 MYL10Q9BUA6 226 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 ALDH8A1Q9H2A2 487 aaPredicted RBP4.6□□□□□ -1.67
CNOT4-202ENST00000356162 RIOX1Q9H6W3 641 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 JMJD4Q9H9V9 463 aa4.6□□□□□ -1.67
CNOT4-202ENST00000356162 DIS3Q9Y2L1 958 aaKnown RBP4.6□□□□□ -1.67
CNOT4-202ENST00000356162 CEP350Q5VT06 3117 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms