RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 LIFRP42702 1097 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 KIF11P52732 1056 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 SOS2Q07890 1332 aaPredicted RBP8.67□□□□□ -1.02
CD46-203ENST00000354848 PDCD2Q16342 344 aaPredicted RBP8.67□□□□□ -1.02
CD46-203ENST00000354848 ADSSL1Q8N142 457 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 ANKRD13CQ8N6S4 541 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 CNKSR1Q969H4 720 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 CHMP6Q96FZ7 201 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
CD46-203ENST00000354848 TUBGCP2Q9BSJ2 902 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 THAP9Q9H5L6 903 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 ARFGEF2Q9Y6D5 1785 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 CFAP73A6NFT4 308 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 RAD51CO43502 376 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 ZPR1O75312 459 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 NEFHP12036 1026 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 ECHS1P30084 290 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 ABL2P42684 1182 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 FOXO4P98177 505 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 SCARF1Q14162 830 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 C1orf141Q5JVX7 400 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 AGBL2Q5U5Z8 902 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 MTMR8Q96EF0 704 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 UBAC1Q9BSL1 405 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 RMND1Q9NWS8 449 aa8.67□□□□□ -1.02
CD46-203ENST00000354848 MAGEC2Q9UBF1 373 aaPredicted RBP8.67□□□□□ -1.02
CD46-203ENST00000354848 RTN3O95197 1032 aaPredicted RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 LCA5LO95447 670 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 RBM5P52756 815 aaKnown RBP eCLIP8.66□□□□□ -1.024e-21■■■■□ 19.4
CD46-203ENST00000354848 MAGOHP61326 146 aaKnown RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 PSMD2Q13200 908 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 HLTFQ14527 1009 aaKnown RBP eCLIP8.66□□□□□ -1.022e-6■■□□□ 13.6
CD46-203ENST00000354848 TBC1D25Q3MII6 688 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 CWF19L1Q69YN2 538 aaKnown RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 ANKS4BQ8N8V4 417 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 DRAXINQ8NBI3 349 aaPredicted RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 MAGOHBQ96A72 148 aaKnown RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 TRIM47Q96LD4 638 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 SWAP70Q9UH65 585 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 PLAGL2Q9UPG8 496 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 BUB1O43683 1085 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 CCND1P24385 295 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 EIF4A3P38919 411 aaKnown RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 ZAP70P43403 619 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 PAPOLAP51003 745 aaKnown RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 MKRN4PQ13434 485 aaPredicted RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 CHADLQ6NUI6 762 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 C2CD5Q86YS7 1000 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 CRACR2BQ8N4Y2 399 aaPredicted RBP8.66□□□□□ -1.02
CD46-203ENST00000354848 CNKSR2Q8WXI2 1034 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 SHISA4Q96DD7 197 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 EEF2KMTQ96G04 330 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 FAM167BQ9BTA0 163 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 ISCUQ9H1K1 167 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 ZSWIM5Q9P217 1185 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 NID2Q14112 1375 aa8.66□□□□□ -1.02
CD46-203ENST00000354848 USP54Q70EL1 1684 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 A0A1W2PQJ5 194 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 EYA2O00167 538 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 ATP4AP20648 1035 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 HNRNPH3P31942 346 aaKnown RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 MAGEA1P43355 309 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 DNA2P51530 1060 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 ERVK-9P63128 1117 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 KCNJ2P63252 427 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 SF3A3Q12874 501 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■■■■□ 20.9
CD46-203ENST00000354848 ZNF174Q15697 407 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 RTN1Q16799 776 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 FAM133BQ5BKY9 247 aaKnown RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 ERMARDQ5T6L9 678 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 MFN1Q8IWA4 741 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 ABTB2Q8N961 1025 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 MDM1Q8TC05 714 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.65□□□□□ -1.02
CD46-203ENST00000354848 LRRC45Q96CN5 670 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 XPO6Q96QU8 1125 aaKnown RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 PAPOLBQ9NRJ5 636 aaKnown RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 ZFATQ9P243 1243 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 TSKSQ9UJT2 592 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 AGAP1Q9UPQ3 857 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 ZBTB12Q9Y330 459 aaPredicted RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 LRP6O75581 1613 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 PJA2O43164 708 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 AKR1B10O60218 316 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 UPP2O95045 317 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 MYBP10242 640 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 NQO1P15559 274 aaKnown RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 FERP16591 822 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 ADORA1P30542 326 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 RNASE9P60153 205 aaKnown RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 FIGNQ5HY92 759 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 ARMC3Q5W041 872 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 PI16Q6UXB8 463 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 SPICE1Q8N0Z3 855 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 NUP133Q8WUM0 1156 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 LPIN2Q92539 896 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 PRCCQ92733 491 aaPredicted RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 LRRC59Q96AG4 307 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms