RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 ECE1P42892 770 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 ARHGAP4P98171 946 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 BMS1Q14692 1282 aaKnown RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 SNRNP48Q6IEG0 339 aaKnown RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 LEKR1Q6ZMV7 388 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 FMR1NBQ8N0W7 255 aaPredicted RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 ANKRD13CQ8N6S4 541 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 RMDN3Q96TC7 470 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 RTFDC1Q9BY42 306 aaPredicted RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 LARSQ9P2J5 1176 aaKnown RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 PRDM4Q9UKN5 801 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 DLATP10515 647 aaKnown RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 TAL1P17542 331 aaPredicted RBP13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 USP14P54578 494 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 CXCL9Q07325 125 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 ADAM9Q13443 819 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 Q3C1V9 767 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 IQCEQ6IPM2 695 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 STYK1Q6J9G0 422 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 HHIPL2Q6UWX4 724 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 TAX1BP1Q86VP1 789 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 ACER1Q8TDN7 264 aa13.68□□□□□ -0.22
PCDHB11-201ENST00000354757 DISP2A7MBM2 1401 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 E9PMD0 336 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 MARK3P27448 753 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 SPATA1Q5VX52 437 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 C16orf86Q6ZW13 317 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 NBPF11Q86T75 865 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 DEFB129Q9H1M3 183 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 DISC1Q9NRI5 854 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 ABCB11O95342 1321 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 STK36Q9NRP7 1315 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 CTNNA2P26232 953 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 ZNF543Q08ER8 600 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 ELF2Q15723 593 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 SEPT9Q9UHD8 586 aaPredicted RBP13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 FZD1Q9UP38 647 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEB3A0JP26 581 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 TRIM49BA6NDI0 452 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 POTECB2RU33 542 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 KRT19P08727 400 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 RHOXF2BP0C7M4 288 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 TNNI1P19237 187 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEBQ6S5H4 581 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 RNF207Q6ZRF8 634 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 HPS3Q969F9 1004 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 ZNF668Q96K58 619 aaPredicted RBP13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 RHOXF2Q9BQY4 288 aa13.67□□□□□ -0.22
PCDHB11-201ENST00000354757 TACC1O75410 805 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 IREB2P48200 963 aaKnown RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 KRT83P78385 493 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 PCIF1Q9H4Z3 704 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ARMCX3Q9UH62 379 aaPredicted RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 CALUO43852 315 aaPredicted RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ERLIN2O94905 339 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ST3GAL1Q11201 340 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 NAA30Q147X3 362 aaPredicted RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ALDH8A1Q9H2A2 487 aaPredicted RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 PLEKHA4Q9H4M7 779 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 MYOZ2Q9NPC6 264 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 MYO6Q9UM54 1294 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 SUGT1Q9Y2Z0 365 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 PLSCR1O15162 318 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ZSCAN20P17040 1043 aaPredicted RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 CA8P35219 290 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ZFPM1Q8IX07 1006 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 DEPTORQ8TB45 409 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 DDX4Q9NQI0 724 aaKnown RBP13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 RNF146Q9NTX7 359 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 ANKFY1Q9P2R3 1169 aa13.66□□□□□ -0.22
PCDHB11-201ENST00000354757 CTAGE9A4FU28 777 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEFA5A3E0 1075 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 ZBTB22O15209 634 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 XRCC5P13010 732 aaKnown RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 KMT5BQ4FZB7 885 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 RESP18Q5W5W9 173 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEGQ6S5H5 508 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 POTEEQ6S8J3 1075 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 TMEM87AQ8NBN3 555 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 CACTINQ8WUQ7 758 aaKnown RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 ZKSCAN4Q969J2 545 aaPredicted RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 PDGFDQ9GZP0 370 aaPredicted RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 HERC5Q9UII4 1024 aaKnown RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 COL4A3BPQ9Y5P4 624 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 SLU7O95391 586 aaKnown RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 GCFC2P16383 781 aaKnown RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 NR2F2P24468 414 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 CETN2P41208 172 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 POLGP54098 1239 aaPredicted RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 NCBP1Q09161 790 aaKnown RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 MTERF2Q49AM1 385 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 FAM160B2Q86V87 743 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 DCAF4Q8WV16 495 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 CEP170P1Q96L14 293 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 CNOT6LQ96LI5 555 aaKnown RBP13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 TUBGCP2Q9BSJ2 902 aa13.65□□□□□ -0.22
PCDHB11-201ENST00000354757 CCDC113Q9H0I3 377 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms