RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 C2CD5Q86YS7 1000 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 IQCKQ8N0W5 287 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 LRRC27Q9C0I9 530 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 PP2D1A8MPX8 630 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 STXBP3O00186 592 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 MOCS3O95396 460 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 INPP5BP32019 993 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 ASIC1P78348 528 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 IRX3P78415 501 aaPredicted RBP12.66□□□□□ -0.38
CAPN9-202ENST00000354537 PAK2Q13177 524 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 FAM47AQ5JRC9 791 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 TYW1BQ6NUM6 668 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 INTS5Q6P9B9 1019 aaKnown RBP12.66□□□□□ -0.38
CAPN9-202ENST00000354537 GUF1Q8N442 669 aaKnown RBP12.66□□□□□ -0.38
CAPN9-202ENST00000354537 HDAC7Q8WUI4 952 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 FAM84BQ96KN1 310 aaPredicted RBP12.66□□□□□ -0.38
CAPN9-202ENST00000354537 PLEKHA4Q9H4M7 779 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 STK17AQ9UEE5 414 aa12.66□□□□□ -0.38
CAPN9-202ENST00000354537 KIAA1551Q9HCM1 1747 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 NMT2O60551 498 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 SMARCA1P28370 1054 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 PSMD2Q13200 908 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 EZH2Q15910 746 aaKnown RBP12.65□□□□□ -0.38
CAPN9-202ENST00000354537 INF2Q27J81 1249 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 TTMPQ5BVD1 217 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 UNC13DQ70J99 1090 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 KRT26Q7Z3Y9 468 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 PNMA1Q8ND90 353 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 LRRC15Q8TF66 581 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 CALML4Q96GE6 196 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 TLR10Q9BXR5 811 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 ZMYND12Q9H0C1 365 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 SEMA6BQ9H3T3 888 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 MLXIPQ9HAP2 919 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 MAD2L2Q9UI95 211 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 BAZ2AQ9UIF9 1905 aaKnown RBP12.65□□□□□ -0.38
CAPN9-202ENST00000354537 CES2O00748 559 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 PDXDC1Q6P996 788 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 CNPY4Q8N129 248 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 PROM2Q8N271 834 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 TSEN2Q8NCE0 465 aaKnown RBP12.65□□□□□ -0.38
CAPN9-202ENST00000354537 WHAMMQ8TF30 809 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 BAP1Q92560 729 aa12.65□□□□□ -0.38
CAPN9-202ENST00000354537 RRP36Q96EU6 259 aaKnown RBP12.65□□□□□ -0.38
CAPN9-202ENST00000354537 ROBO3Q96MS0 1386 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 FSBPO95073 299 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 MECOMQ03112 1051 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 NONOQ15233 471 aaKnown RBP eCLIP12.64□□□□□ -0.39
CAPN9-202ENST00000354537 CFAP58Q5T655 872 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 KLHDC7AQ5VTJ3 777 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 NFRKBQ6P4R8 1299 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 SV2BQ7L1I2 683 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 KIAA0895Q8NCT3 520 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 GPKOWQ92917 476 aaPredicted RBP eCLIP12.64□□□□□ -0.39
CAPN9-202ENST00000354537 ZBTB9Q96C00 473 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 MAST2Q6P0Q8 1798 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 CASZ1Q86V15 1759 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
CAPN9-202ENST00000354537 RGL2O15211 777 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 PLEKP08567 350 aaPredicted RBP12.64□□□□□ -0.39
CAPN9-202ENST00000354537 GNA11P29992 359 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 RPAINQ86UA6 219 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 C3orf20Q8ND61 904 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 SMCR8Q8TEV9 937 aaPredicted RBP12.64□□□□□ -0.39
CAPN9-202ENST00000354537 ARL8AQ96BM9 186 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 ZIM3Q96PE6 472 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 SPZ1Q9BXG8 430 aa12.64□□□□□ -0.39
CAPN9-202ENST00000354537 FCER1AP12319 257 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 TFAP4Q01664 338 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.63□□□□□ -0.39
CAPN9-202ENST00000354537 PRPF38AQ8NAV1 312 aaKnown RBP12.63□□□□□ -0.39
CAPN9-202ENST00000354537 RASGRP4Q8TDF6 673 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 NCAPGQ9BPX3 1015 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 EPN3Q9H201 632 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 C6orf50Q9HD87 102 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 A1CFQ9NQ94 594 aaKnown RBP12.63□□□□□ -0.39
CAPN9-202ENST00000354537 IL17RBQ9NRM6 502 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 LRRC53A6NM62 1247 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 HMGB1P1B2RPK0 211 aaPredicted RBP12.63□□□□□ -0.39
CAPN9-202ENST00000354537 ANKRD65E5RJM6 399 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 NDUFAB1O14561 156 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 MEFVO15553 781 aaPredicted RBP12.63□□□□□ -0.39
CAPN9-202ENST00000354537 KIAA0754O94854 1291 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 SERPING1P05155 500 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 SEPT2Q15019 361 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 C12orf60Q5U649 245 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 LRIG3Q6UXM1 1119 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 RRAGAQ7L523 313 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 CCDC91Q7Z6B0 441 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 MMRN2Q9H8L6 949 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 RBM12Q9NTZ6 932 aaKnown RBP12.63□□□□□ -0.39
CAPN9-202ENST00000354537 MINPP1Q9UNW1 487 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 NIP7Q9Y221 180 aaKnown RBP eCLIP12.63□□□□□ -0.39
CAPN9-202ENST00000354537 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
CAPN9-202ENST00000354537 ESYT2A0FGR8 921 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 BTNL10A8MVZ5 291 aa12.62□□□□□ -0.39
CAPN9-202ENST00000354537 HNRNPH1P31943 449 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms