RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 STK17AQ9UEE5 414 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 DDX25Q9UHL0 483 aaKnown RBP7.8□□□□□ -1.16
TRIM55-203ENST00000350034 BCS1LQ9Y276 419 aa7.8□□□□□ -1.16
TRIM55-203ENST00000350034 CUL9Q8IWT3 2517 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 TBX3O15119 743 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 TOMM70O94826 608 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 CYP3A4P08684 503 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 SREBF1P36956 1147 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 TXKP42681 527 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 GMPSP49915 693 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-203ENST00000350034 STAT2P52630 851 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 UBASH3AP57075 661 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 SNAP25P60880 206 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 CCZ1BP86790 482 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 CCZ1P86791 482 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-203ENST00000350034 RASSF7Q02833 373 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 LRMPQ12912 555 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 ARID5BQ14865 1188 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 TMEM266Q2M3C6 531 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 KMT5BQ4FZB7 885 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 Q4G0T1 1027 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 COBLL1Q53SF7 1204 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 FAM83BQ5T0W9 1011 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.79□□□□□ -1.16
TRIM55-203ENST00000350034 MIGA2Q7L4E1 593 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 VSTM4Q8IW00 320 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 MICALL2Q8IY33 904 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 TRMT44Q8IYL2 757 aaKnown RBP7.79□□□□□ -1.16
TRIM55-203ENST00000350034 CHURC1Q8WUH1 139 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 GTPBP4Q9BZE4 634 aaKnown RBP7.79□□□□□ -1.16
TRIM55-203ENST00000350034 RAB34Q9BZG1 259 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 TRIM9Q9C026 710 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 SH2D4AQ9H788 454 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 KCND1Q9NSA2 647 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 SAMSN1Q9NSI8 373 aaKnown RBP7.79□□□□□ -1.16
TRIM55-203ENST00000350034 RWDD2AQ9UIY3 292 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 ZNF112Q9UJU3 913 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 FEM1BQ9UK73 627 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 ARFGEF1Q9Y6D6 1849 aa7.79□□□□□ -1.16
TRIM55-203ENST00000350034 A0A1B0GTH6 734 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 LRRC10BA6NIK2 292 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 RAD21O60216 631 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 CTNND1O60716 968 aaKnown RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 SERPINC1P01008 464 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 HOXA7P31268 230 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 KCNJ6P48051 423 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 TERF1P54274 439 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 ARHGAP4P98171 946 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 GHRHRQ02643 423 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 TBX2Q13207 712 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 NR1I3Q14994 352 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 PRPF38BQ5VTL8 546 aaKnown RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 ARMCX5Q6P1M9 558 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 TMC6Q7Z403 805 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 SMYD4Q8IYR2 804 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 SPICE1Q8N0Z3 855 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 ADSSL1Q8N142 457 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 C17orf53Q8N3J3 647 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 CCDC150Q8NCX0 1101 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 GIMAP8Q8ND71 665 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 NLGN2Q8NFZ4 835 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 ETNPPLQ8TBG4 499 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 LENG9Q96B70 501 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 CALML4Q96GE6 196 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 NUDT12Q9BQG2 462 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 GLIS2Q9BZE0 524 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 KIAA1683Q9H0B3 1180 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 PRDM10Q9NQV6 1147 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 LRWD1Q9UFC0 647 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 CNOT7Q9UIV1 285 aaKnown RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 GDAQ9Y2T3 454 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 ASTN2O75129 1339 aaPredicted RBP7.78□□□□□ -1.16
TRIM55-203ENST00000350034 ZNF541Q9H0D2 1346 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 SYNRGQ9UMZ2 1314 aa7.78□□□□□ -1.16
TRIM55-203ENST00000350034 PVALEFA0A1B0GWK0 134 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 POTEMA6NI47 508 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 PBX1P40424 430 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 PPP1R2P41236 205 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 PRCPP42785 496 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 STX17P56962 302 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 AMPD3Q01432 767 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 EHHADHQ08426 723 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 SPIRE1Q08AE8 756 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 IKQ13123 557 aaPredicted RBP7.77□□□□□ -1.17
TRIM55-203ENST00000350034 PAK1Q13153 545 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 ECM1Q16610 540 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 KIF4BQ2VIQ3 1234 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 KRT79Q5XKE5 535 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 SAMD7Q7Z3H4 446 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 FILIP1Q7Z7B0 1213 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 SLFN12Q8IYM2 578 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 NELFBQ8WX92 580 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 LPAR1Q92633 364 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 RAD54LQ92698 747 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 FAM20AQ96MK3 541 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 PLIN2Q99541 437 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 TMX1Q9H3N1 280 aa7.77□□□□□ -1.17
TRIM55-203ENST00000350034 ADD3Q9UEY8 706 aaKnown RBP7.77□□□□□ -1.17
TRIM55-203ENST00000350034 LIMA1Q9UHB6 759 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms