RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CAPN10Q9HC96 672 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 LMBRD1Q9NUN5 540 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 STRIP2Q9ULQ0 834 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 TPX2Q9ULW0 747 aaKnown RBP9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 STRCP1A6NGW2 1772 aa9.19□□□□□ -0.94
UBE2D3-204ENST00000349311 TPM3P06753 285 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 FGRP09769 529 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 POLR2BP30876 1174 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 SLC20A2Q08357 652 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 RABEP1Q15276 862 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 SYCP1Q15431 976 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 MCTP1Q6DN14 999 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 EDC4Q6P2E9 1401 aaKnown RBP9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 ZNF771Q7L3S4 317 aaPredicted RBP9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 PHACTR4Q8IZ21 702 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 KREMEN1Q96MU8 473 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 C8orf37Q96NL8 207 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 LRRC7Q96NW7 1537 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 FERD3LQ96RJ6 166 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.18□□□□□ -0.942e-8■■□□□ 14.3
UBE2D3-204ENST00000349311 TSPYL1Q9H0U9 437 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 OGFRQ9NZT2 677 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 VAV3Q9UKW4 847 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 DDX19BQ9UMR2 479 aa9.18□□□□□ -0.94
UBE2D3-204ENST00000349311 XIRP1Q702N8 1843 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 PPIP5K1Q6PFW1 1433 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 SRFP11831 508 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 ZC3H6P61129 1189 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 PRKCQQ04759 706 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 TNK2Q07912 1038 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 SAFB2Q14151 953 aaKnown RBP eCLIP9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 BMP2KLQ5H9B9 411 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 CCDC81Q6ZN84 652 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 CREBRFQ8IUR6 639 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 FTSJ3Q8IY81 847 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 Q8N3U1 123 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 MFSD4AQ8N468 514 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 FAM184AQ8NB25 1140 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 OR6P1Q8NGX9 317 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 PIWIL2Q8TC59 973 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 MISP3Q96FF7 219 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 SLC26A8Q96RN1 970 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 DNAJC2Q99543 621 aaKnown RBP9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 ASPNQ9BXN1 380 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 ZFP64Q9NPA5 681 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 SEMA3GQ9NS98 782 aa9.17□□□□□ -0.94
UBE2D3-204ENST00000349311 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.17□□□□□ -0.944e-6■□□□□ 11
UBE2D3-204ENST00000349311 LMTK3Q96Q04 1460 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 TMEM265A0A087WTH1 108 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 CLCN7P51798 805 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 ATP2B3Q16720 1220 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 HDGFL2Q7Z4V5 671 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 TMEM192Q8IY95 271 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 C19orf47Q8N9M1 422 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 BCL7CQ8WUZ0 217 aaPredicted RBP9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 RUNDC1Q96C34 613 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 CHMP4BQ9H444 224 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 TSPY26PQ9H489 355 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 SPTLC3Q9NUV7 552 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 MARF1Q9Y4F3 1742 aaKnown RBP9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 KIF1AQ12756 1690 aa9.16□□□□□ -0.94
UBE2D3-204ENST00000349311 ADGRL3Q9HAR2 1447 aa9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 GUCY2CP25092 1073 aa9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 GBP1P32455 592 aa9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 EIF6P56537 245 aaKnown RBP9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 NUCB1Q02818 461 aa9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 NOLC1Q14978 699 aaKnown RBP eCLIP9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 NBPF12Q5TAG4 269 aaPredicted RBP9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 RUFY4Q6ZNE9 571 aa9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 ANKRD7Q92527 254 aa9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 PCMTD2Q9NV79 361 aa9.15□□□□□ -0.94
UBE2D3-204ENST00000349311 PITPNM2Q9BZ72 1349 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 GNAT3A8MTJ3 354 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 KCNA6P17658 529 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 GNL2Q13823 731 aaKnown RBP9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 VSIG10LQ86VR7 867 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 VPS37DQ86XT2 251 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 DTWD2Q8NBA8 298 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 GPR62Q9BZJ7 368 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 SSH2Q76I76 1423 aa9.14□□□□□ -0.95
UBE2D3-204ENST00000349311 LOC100996750A0A140TA64 210 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 CASP7P55210 303 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 ZYXQ15942 572 aaKnown RBP9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 UNC5AQ6ZN44 842 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 MCF2L2Q86YR7 1114 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 STK11IPQ8N1F8 1099 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 FAM169BQ8N8A8 192 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 KRTAP4-6Q9BYQ5 205 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 DUSP15Q9H1R2 295 aaPredicted RBP9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 CALCOCO1Q9P1Z2 691 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 CGNQ9P2M7 1197 aaKnown RBP9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 DCCP43146 1447 aa9.13□□□□□ -0.95
UBE2D3-204ENST00000349311 LTBP3Q9NS15 1303 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 LRRN2O75325 713 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 CDC45O75419 566 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 CBX7O95931 251 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 ITIH2P19823 946 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 ARID5AQ03989 594 aa9.12□□□□□ -0.95
UBE2D3-204ENST00000349311 NAALADL2Q58DX5 795 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms