RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 ERVK-9P63128 1117 aa15.77■□□□□ 0.11
RLIM-202ENST00000349225 SARNPP82979 210 aaKnown RBP15.77■□□□□ 0.11
RLIM-202ENST00000349225 WTAPQ15007 396 aa15.77■□□□□ 0.11
RLIM-202ENST00000349225 UBAC1Q9BSL1 405 aa15.77■□□□□ 0.11
RLIM-202ENST00000349225 MYBP10242 640 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 HNRNPH3P31942 346 aaKnown RBP15.76■□□□□ 0.11
RLIM-202ENST00000349225 GFPT1Q06210 699 aaPredicted RBP15.76■□□□□ 0.11
RLIM-202ENST00000349225 AKNAD1Q5T1N1 836 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 FAM43BQ6ZT52 329 aaPredicted RBP15.76■□□□□ 0.11
RLIM-202ENST00000349225 DDX42Q86XP3 938 aaKnown RBP eCLIP15.76■□□□□ 0.11
RLIM-202ENST00000349225 PLEKHA8P1O95397 391 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 VEGFAP15692 232 aaPredicted RBP15.76■□□□□ 0.11
RLIM-202ENST00000349225 CEBPAP49715 358 aaPredicted RBP15.76■□□□□ 0.11
RLIM-202ENST00000349225 ZKSCAN8Q15776 578 aaPredicted RBP15.76■□□□□ 0.11
RLIM-202ENST00000349225 CACNA2D3Q8IZS8 1091 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 ARMC2Q8NEN0 867 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 HOOK2Q96ED9 719 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 MYH7BA7E2Y1 1941 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 STRCP1A6NGW2 1772 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 PP2D1A8MPX8 630 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 USO1O60763 962 aaKnown RBP15.76■□□□□ 0.11
RLIM-202ENST00000349225 PAEPP09466 180 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 SLC1A4P43007 532 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 RASSF7Q02833 373 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 RETREG2Q8NC44 543 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 C3orf20Q8ND61 904 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.76■□□□□ 0.11
RLIM-202ENST00000349225 ZBTB3Q9H5J0 574 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 KCNMB3Q9NPA1 279 aa15.76■□□□□ 0.11
RLIM-202ENST00000349225 MYH1P12882 1939 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 ANP32DO95626 131 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 UBE3CQ15386 1083 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 ASTE1Q2TB18 679 aaPredicted RBP15.75■□□□□ 0.11
RLIM-202ENST00000349225 CFAP221Q4G0U5 840 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 ANKRD40Q6AI12 368 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 MDM1Q8TC05 714 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 WHAMMQ8TF30 809 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 CNOT6LQ96LI5 555 aaKnown RBP15.75■□□□□ 0.11
RLIM-202ENST00000349225 C15orf41Q9Y2V0 281 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 SLC4A4Q9Y6R1 1079 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 LMTK3Q96Q04 1460 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 A0A1W2PQJ5 194 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 MCM7P33993 719 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 IFFO1Q0D2I5 559 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 PPP1R7Q15435 360 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 CSGALNACT2Q8N6G5 542 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 L3MBTL3Q96JM7 780 aaPredicted RBP15.75■□□□□ 0.11
RLIM-202ENST00000349225 PCMTD1Q96MG8 357 aaPredicted RBP15.75■□□□□ 0.11
RLIM-202ENST00000349225 INPP4AQ96PE3 977 aaPredicted RBP15.75■□□□□ 0.11
RLIM-202ENST00000349225 KDM4CQ9H3R0 1056 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 PANK4Q9NVE7 773 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 TRPC6Q9Y210 931 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 KIF1AQ12756 1690 aa15.75■□□□□ 0.11
RLIM-202ENST00000349225 ENO4A6NNW6 628 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 GSG1L2A8MUP6 293 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 BUB1BO60566 1050 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 CLSTN1O94985 981 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 FTCDO95954 541 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 KCNA6P17658 529 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 ZSCAN29Q8IWY8 852 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 MICAL1Q8TDZ2 1067 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 ERGIC2Q96RQ1 377 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 RNF26Q9BY78 433 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 NDST4Q9H3R1 872 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.74■□□□□ 0.11
RLIM-202ENST00000349225 ABCC12Q96J65 1359 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 GCOM1H8Y6P7 765 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 PJA2O43164 708 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 MYZAPP0CAP1 466 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 PHKG2P15735 406 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 ALX1Q15699 326 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 AGAP11Q8TF27 550 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 TCP11Q8WWU5 503 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 ZBTB10Q96DT7 871 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 PLIN2Q99541 437 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 MTFR1LQ9H019 292 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 TAF1DQ9H5J8 278 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 ARMT1Q9H993 441 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 FAM207AQ9NSI2 230 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 RMND1Q9NWS8 449 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 SLC12A4Q9UP95 1085 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 PHF8Q9UPP1 1060 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 SIK3Q9Y2K2 1263 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 V9GY48 417 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 AP1G2O75843 785 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 SMNDC1O75940 238 aaKnown RBP eCLIP15.74■□□□□ 0.11
RLIM-202ENST00000349225 UPP2O95045 317 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 PCCAP05165 728 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 MIS18BP1Q6P0N0 1132 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 GIMAP8Q8ND71 665 aaPredicted RBP15.74■□□□□ 0.11
RLIM-202ENST00000349225 ALS2CR12Q96Q35 445 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 AGAP1Q9UPQ3 857 aa15.74■□□□□ 0.11
RLIM-202ENST00000349225 GCP02774 474 aa15.73■□□□□ 0.11
RLIM-202ENST00000349225 PPP2R2AP63151 447 aa15.73■□□□□ 0.11
RLIM-202ENST00000349225 FIGNQ5HY92 759 aa15.73■□□□□ 0.11
RLIM-202ENST00000349225 C4orf32Q8N8J7 132 aa15.73■□□□□ 0.11
RLIM-202ENST00000349225 RBM33Q96EV2 1170 aaKnown RBP15.73■□□□□ 0.11
RLIM-202ENST00000349225 ACSBG1Q96GR2 724 aa15.73■□□□□ 0.11
RLIM-202ENST00000349225 RSRC1Q96IZ7 334 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms