RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 GJA3Q9Y6H8 435 aa15.55■□□□□ 0.08
TRIM4-201ENST00000349062 TFRCP02786 760 aaKnown RBP15.54■□□□□ 0.08
TRIM4-201ENST00000349062 ZDHHC15Q96MV8 337 aa15.54■□□□□ 0.08
TRIM4-201ENST00000349062 MORC2Q9Y6X9 1032 aaPredicted RBP15.54■□□□□ 0.08
TRIM4-201ENST00000349062 MYH1P12882 1939 aa15.54■□□□□ 0.08
TRIM4-201ENST00000349062 DDX39AO00148 427 aaKnown RBP15.54■□□□□ 0.08
TRIM4-201ENST00000349062 PRKG1Q13976 671 aa15.54■□□□□ 0.08
TRIM4-201ENST00000349062 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
TRIM4-201ENST00000349062 FBXO28Q9NVF7 368 aa15.54■□□□□ 0.08
TRIM4-201ENST00000349062 RNF216Q9NWF9 866 aaPredicted RBP15.54■□□□□ 0.08
TRIM4-201ENST00000349062 ADD3Q9UEY8 706 aaKnown RBP15.54■□□□□ 0.08
TRIM4-201ENST00000349062 POTEB3A0JP26 581 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 POTECB2RU33 542 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 TRIM21P19474 475 aaKnown RBP15.53■□□□□ 0.08
TRIM4-201ENST00000349062 POTEBQ6S5H4 581 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 TTLL6Q8N841 843 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 SPATA20Q8TB22 786 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 WDR24Q96S15 920 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 TRIM9Q9C026 710 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 COL24A1Q17RW2 1714 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 A0A1W2PRG0 241 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 TCP11X2Q5H9J9 407 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 FAM83BQ5T0W9 1011 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 ANKRD40Q6AI12 368 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 GALNT17Q6IS24 598 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 ERO1AQ96HE7 468 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 MYMKA6NI61 221 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 SPDYE3A6NKU9 549 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 ABL1P00519 1130 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 ECM1Q16610 540 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 NYAP1Q6ZVC0 841 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 UBXN4Q92575 508 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 MMTAG2Q9BU76 263 aaKnown RBP15.53■□□□□ 0.08
TRIM4-201ENST00000349062 CARD6Q9BX69 1037 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 GLIS2Q9BZE0 524 aaPredicted RBP15.53■□□□□ 0.08
TRIM4-201ENST00000349062 MRPL44Q9H9J2 332 aaKnown RBP15.53■□□□□ 0.08
TRIM4-201ENST00000349062 LY75O60449 1722 aa15.53■□□□□ 0.08
TRIM4-201ENST00000349062 A0A1B0GTH6 734 aa15.52■□□□□ 0.08
TRIM4-201ENST00000349062 TBC1D10BQ4KMP7 808 aaPredicted RBP15.52■□□□□ 0.08
TRIM4-201ENST00000349062 RAD9BQ6WBX8 426 aa15.52■□□□□ 0.08
TRIM4-201ENST00000349062 MAEAQ7L5Y9 396 aa15.52■□□□□ 0.08
TRIM4-201ENST00000349062 LARP4BQ92615 738 aaKnown RBP15.52■□□□□ 0.08
TRIM4-201ENST00000349062 FAM207AQ9NSI2 230 aaPredicted RBP15.52■□□□□ 0.08
TRIM4-201ENST00000349062 ARHGAP6O43182 974 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 GPATCH4Q5T3I0 446 aaKnown RBP15.52■□□□□ 0.07
TRIM4-201ENST00000349062 CC2D2BQ6DHV5 1058 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 CHP1Q99653 195 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 CRACR2AQ9BSW2 395 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 POTEFA5A3E0 1075 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 SFI1A8K8P3 1242 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 ZSCAN12O43309 604 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 GYPCP04921 128 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 POTEIP0CG38 1075 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 TBC1D8BQ0IIM8 1120 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.07
TRIM4-201ENST00000349062 GRB10Q13322 594 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 TSR1Q2NL82 804 aaKnown RBP15.52■□□□□ 0.07
TRIM4-201ENST00000349062 NBPF9Q3BBW0 867 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 POTEGQ6S5H5 508 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 POTEEQ6S8J3 1075 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 FBXO11Q86XK2 927 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 ANO3Q9BYT9 981 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 MMRN2Q9H8L6 949 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 PUF60Q9UHX1 559 aaKnown RBP15.52■□□□□ 0.07
TRIM4-201ENST00000349062 RWDD2AQ9UIY3 292 aa15.52■□□□□ 0.07
TRIM4-201ENST00000349062 ADAMTSL1Q8N6G6 1762 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 SEC31AO94979 1220 aaKnown RBP15.51■□□□□ 0.07
TRIM4-201ENST00000349062 CASQ1P31415 396 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 TEX35Q5T0J7 233 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 TAF3Q5VWG9 929 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 CCDC155Q8N6L0 562 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 DDX12PQ92771 950 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 RAB34Q9BZG1 259 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 ZCCHC17Q9NP64 241 aaKnown RBP15.51■□□□□ 0.07
TRIM4-201ENST00000349062 TMEM51Q9NW97 253 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 ZBTB21Q9ULJ3 1066 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 KIAA1551Q9HCM1 1747 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 NAV1Q8NEY1 1877 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 ETF1P62495 437 aaKnown RBP15.51■□□□□ 0.07
TRIM4-201ENST00000349062 ARID5AQ03989 594 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 ZNF569Q5MCW4 686 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 TMED8Q6PL24 325 aaPredicted RBP15.51■□□□□ 0.07
TRIM4-201ENST00000349062 ADSSL1Q8N142 457 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 RGS22Q8NE09 1264 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 NEK11Q8NG66 645 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 CTAGE1Q96RT6 745 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 SH2D3AQ9BRG2 576 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 NOC4LQ9BVI4 516 aaKnown RBP15.51■□□□□ 0.07
TRIM4-201ENST00000349062 TRIM10Q9UDY6 481 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 GUCA1BQ9UMX6 200 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 BCS1LQ9Y276 419 aa15.51■□□□□ 0.07
TRIM4-201ENST00000349062 BMP3P12645 472 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 DNA2P51530 1060 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 PLS1Q14651 629 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 CCDC17Q96LX7 622 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 SORBS3O60504 671 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 AMPD3Q01432 767 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 BMS1Q14692 1282 aaKnown RBP15.5■□□□□ 0.07
TRIM4-201ENST00000349062 SYCP1Q15431 976 aa15.5■□□□□ 0.07
TRIM4-201ENST00000349062 SIAH1Q8IUQ4 282 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms