RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 STK4Q13043 487 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 POTEBQ6S5H4 581 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 ZNF713Q8N859 430 aaPredicted RBP19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 IGSF22Q8N9C0 903 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 LARP4BQ92615 738 aaKnown RBP19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 PMS1P54277 932 aaKnown RBP19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 AMPD3Q01432 767 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 TNIP1Q15025 636 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 KCNK18Q7Z418 384 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 VSTM4Q8IW00 320 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 GMLQ99445 158 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 CCSER1Q9C0I3 900 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 DESI2Q9BSY9 194 aa19.24■□□□□ 0.67
SMARCC2-202ENST00000347471 NOVP48745 357 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 CSGALNACT2Q8N6G5 542 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 INPP5BP32019 993 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 SPECC1LQ69YQ0 1117 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 MKL1Q969V6 931 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 AK8Q96MA6 479 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 MMTAG2Q9BU76 263 aaKnown RBP19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 TRIM9Q9C026 710 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 ALAS1P13196 640 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 UBXN1Q04323 297 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 DLK2Q6UY11 383 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 NELFCDQ8IXH7 590 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 AGBL3Q8NEM8 1001 aa19.23■□□□□ 0.67
SMARCC2-202ENST00000347471 PRPHP41219 470 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 TGFB2P61812 414 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 GRB10Q13322 594 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 C10orf71Q711Q0 1435 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 NPHP3-ACAD11A0A0J9YXS1 232 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 KCNJ18B7U540 433 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 KCNJ12Q14500 433 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 NBPF12Q5TAG4 269 aaPredicted RBP19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 POTEFA5A3E0 1075 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 POTEIP0CG38 1075 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 CAP2P40123 477 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 MTIF2P46199 727 aaKnown RBP19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 PABPC4Q13310 644 aaKnown RBP eCLIP19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 POTEGQ6S5H5 508 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 POTEEQ6S8J3 1075 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 SPATA20Q8TB22 786 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 P2RX7Q99572 595 aaKnown RBP19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 HACL1Q9UJ83 578 aa19.22■□□□□ 0.67
SMARCC2-202ENST00000347471 MYMKA6NI61 221 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 MEIS2O14770 477 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 FLOT1O75955 427 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 KRT31Q15323 416 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 AGBL1Q96MI9 1066 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 BMP2KQ9NSY1 1161 aaPredicted RBP19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 IMPACTQ9P2X3 320 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 HAS1Q92839 578 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 ZKSCAN4Q969J2 545 aaPredicted RBP19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 DEFB129Q9H1M3 183 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 ASNSP08243 561 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 SPP2Q13103 211 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 CCPG1Q9ULG6 757 aa19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 V9GYY5 206 aaPredicted RBP19.21■□□□□ 0.67
SMARCC2-202ENST00000347471 TPM1P09493 284 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 ECM1Q16610 540 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 CEP135Q66GS9 1140 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 CHURC1Q8WUH1 139 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 DDX12PQ92771 950 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 CNTNAP1P78357 1384 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 ANGEL2Q5VTE6 544 aaKnown RBP19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 MTMR9Q96QG7 549 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 VCPKMTQ9H867 229 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 LRRC37AA6NMS7 1700 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 NSMFQ6X4W1 530 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 BAG1Q99933 345 aaPredicted RBP19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 RAVER2Q9HCJ3 691 aaKnown RBP19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 TMX2Q9Y320 296 aa19.2■□□□□ 0.66
SMARCC2-202ENST00000347471 RIOK3O14730 519 aaKnown RBP19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 EDIL3O43854 480 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 ZNF18P17022 549 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 KIF4BQ2VIQ3 1234 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 GLIS3Q8NEA6 775 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 GMCL1Q96IK5 515 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 PNMA5Q96PV4 448 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 KBTBD4Q9NVX7 518 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 PPP1R18Q6NYC8 613 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 FAM86B1E9PN63 330 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 H7C1D1 291 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 FAM86B2P0C5J1 330 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 RBL2Q08999 1139 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 MTMR2Q13614 643 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 TNFAIP1Q13829 316 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 GPBP1Q86WP2 473 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 ELOA2Q8IYF1 753 aaPredicted RBP19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 GMCL1P1Q8NEA9 526 aa19.19■□□□□ 0.66
SMARCC2-202ENST00000347471 GCOM1H8Y6P7 765 aaPredicted RBP19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 SORBS3O60504 671 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 POLR2MP0CAP2 368 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 CASP14P31944 242 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 GRIPAP1Q4V328 841 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 HERC4Q5GLZ8 1057 aaPredicted RBP19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 SYT10Q6XYQ8 523 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 MAEAQ7L5Y9 396 aa19.18■□□□□ 0.66
SMARCC2-202ENST00000347471 CCAR2Q8N163 923 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms